Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
THBS4P35443 MIR548H3-201ENST00000408771 118 ntBASIC2.64□□□□□ -1.99
THBS4P35443 SNORD12B-201ENST00000410433 91 ntBASIC2.64□□□□□ -1.99
THBS4P35443 RNU6-1001P-201ENST00000411265 100 ntBASIC2.64□□□□□ -1.99
THBS4P35443 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
THBS4P35443 AC007215.1-201ENST00000464893 276 ntBASIC2.64□□□□□ -1.99
THBS4P35443 RNA5SP54-201ENST00000516951 92 ntBASIC2.64□□□□□ -1.99
THBS4P35443 RNU6-58P-201ENST00000517143 103 ntBASIC2.64□□□□□ -1.99
THBS4P35443 AC022080.3-201ENST00000544433 482 ntBASIC2.64□□□□□ -1.99
THBS4P35443 EIF4A1P12-201ENST00000551910 141 ntBASIC2.64□□□□□ -1.99
THBS4P35443 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.64□□□□□ -1.99
THBS4P35443 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.64□□□□□ -1.99
THBS4P35443 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
THBS4P35443 Y_RNA.60-201ENST00000362831 98 ntBASIC2.63□□□□□ -1.99
THBS4P35443 Y_RNA.84-201ENST00000363011 104 ntBASIC2.63□□□□□ -1.99
THBS4P35443 SNORD81.1-201ENST00000363064 77 ntBASIC2.63□□□□□ -1.99
THBS4P35443 U3.9-201ENST00000363823 204 ntBASIC2.63□□□□□ -1.99
THBS4P35443 SNORA54-201ENST00000384281 123 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RNU6-318P-201ENST00000384283 103 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RNU6-1274P-201ENST00000384557 107 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RNU6-159P-201ENST00000391080 106 ntBASIC2.63□□□□□ -1.99
THBS4P35443 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
THBS4P35443 MIR320B2-201ENST00000408479 138 ntBASIC2.63□□□□□ -1.99
THBS4P35443 Y_RNA.602-201ENST00000410535 92 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RNU6-1203P-201ENST00000410703 110 ntBASIC2.63□□□□□ -1.99
THBS4P35443 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
THBS4P35443 UBBP3-201ENST00000445497 241 ntBASIC2.63□□□□□ -1.99
THBS4P35443 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.63□□□□□ -1.99
THBS4P35443 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.63□□□□□ -1.99
THBS4P35443 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.63□□□□□ -1.99
THBS4P35443 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RN7SKP49-201ENST00000516675 260 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RNU6-586P-201ENST00000517265 104 ntBASIC2.63□□□□□ -1.99
THBS4P35443 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.63□□□□□ -1.99
THBS4P35443 AC136932.1-201ENST00000574771 208 ntBASIC2.63□□□□□ -1.99
THBS4P35443 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.63□□□□□ -1.99
THBS4P35443 MIR3128-201ENST00000581957 66 ntBASIC2.63□□□□□ -1.99
THBS4P35443 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.63□□□□□ -1.99
THBS4P35443 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.63□□□□□ -1.99
THBS4P35443 MIR5739-201ENST00000619803 80 ntBASIC2.63□□□□□ -1.99
THBS4P35443 AC078938.1-201ENST00000620993 318 ntBASIC2.63□□□□□ -1.99
THBS4P35443 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
THBS4P35443 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
THBS4P35443 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS4P35443 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS4P35443 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
THBS4P35443 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.62□□□□□ -1.99
THBS4P35443 AL391987.6-201ENST00000305671 199 ntBASIC2.62□□□□□ -1.99
THBS4P35443 AC073325.2-201ENST00000339545 159 ntBASIC2.62□□□□□ -1.99
THBS4P35443 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
THBS4P35443 RNU6-873P-201ENST00000363833 107 ntBASIC2.62□□□□□ -1.99
THBS4P35443 SNORD32B-201ENST00000364460 84 ntBASIC2.62□□□□□ -1.99
THBS4P35443 RNU6-937P-201ENST00000384325 106 ntBASIC2.62□□□□□ -1.99
THBS4P35443 Y_RNA.515-201ENST00000384535 112 ntBASIC2.62□□□□□ -1.99
THBS4P35443 MIR95-201ENST00000385072 81 ntBASIC2.62□□□□□ -1.99
THBS4P35443 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
THBS4P35443 SNORD115-46-201ENST00000390982 71 ntBASIC2.62□□□□□ -1.99
THBS4P35443 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.62□□□□□ -1.99
THBS4P35443 AC022018.1-201ENST00000430685 241 ntBASIC2.62□□□□□ -1.99
THBS4P35443 ARL5AP4-201ENST00000430731 512 ntBASIC2.62□□□□□ -1.99
THBS4P35443 Z98949.2-201ENST00000440996 144 ntBASIC2.62□□□□□ -1.99
THBS4P35443 AC098869.1-201ENST00000481627 292 ntBASIC2.62□□□□□ -1.99
THBS4P35443 AC107222.1-201ENST00000510899 637 ntBASIC2.62□□□□□ -1.99
THBS4P35443 RNU6-1023P-201ENST00000516137 106 ntBASIC2.62□□□□□ -1.99
THBS4P35443 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.62□□□□□ -1.99
THBS4P35443 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.62□□□□□ -1.99
THBS4P35443 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.62□□□□□ -1.99
THBS4P35443 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.62□□□□□ -1.99
THBS4P35443 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
THBS4P35443 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.61□□□□□ -1.99
THBS4P35443 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
THBS4P35443 SNORD113-8-201ENST00000363497 74 ntBASIC2.61□□□□□ -1.99
THBS4P35443 SNORD56.5-201ENST00000364281 72 ntBASIC2.61□□□□□ -1.99
THBS4P35443 RNU6-1180P-201ENST00000364935 107 ntBASIC2.61□□□□□ -1.99
THBS4P35443 Y_RNA.478-201ENST00000384358 107 ntBASIC2.61□□□□□ -1.99
THBS4P35443 Y_RNA.562-201ENST00000384695 113 ntBASIC2.61□□□□□ -1.99
THBS4P35443 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
THBS4P35443 NDUFB4P4-201ENST00000404822 243 ntBASIC2.61□□□□□ -1.99
THBS4P35443 RNU2-20P-201ENST00000410425 191 ntBASIC2.61□□□□□ -1.99
THBS4P35443 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.61□□□□□ -1.99
THBS4P35443 AC003685.2-201ENST00000422795 395 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.61□□□□□ -1.99
THBS4P35443 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.61□□□□□ -1.99
THBS4P35443 CYP2C59P-201ENST00000457790 269 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.61□□□□□ -1.99
THBS4P35443 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
THBS4P35443 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.61□□□□□ -1.99
THBS4P35443 DEFB108E-201ENST00000524692 240 ntBASIC2.61□□□□□ -1.99
THBS4P35443 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
THBS4P35443 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
THBS4P35443 AC023043.3-201ENST00000593113 385 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AL356575.1-201ENST00000603008 283 ntBASIC2.61□□□□□ -1.99
THBS4P35443 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.61□□□□□ -1.99
THBS4P35443 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
THBS4P35443 AC010999.1-201ENST00000611856 324 ntBASIC2.61□□□□□ -1.99
THBS4P35443 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.61□□□□□ -1.99
THBS4P35443 ZNF204P-201ENST00000416749 2397 ntBASIC2.61□□□□□ -1.99
THBS4P35443 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms