Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-329P-201ENST00000459618 107 ntBASIC1.77□□□□□ -2.13
RPA1P27694 MTND4P17-201ENST00000470444 350 ntBASIC1.77□□□□□ -2.13
RPA1P27694 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.77□□□□□ -2.13
RPA1P27694 AC087854.1-201ENST00000519706 414 ntBASIC1.77□□□□□ -2.13
RPA1P27694 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.77□□□□□ -2.13
RPA1P27694 CYP4A27P-201ENST00000567218 190 ntBASIC1.77□□□□□ -2.13
RPA1P27694 MIR3169-201ENST00000578032 83 ntBASIC1.77□□□□□ -2.13
RPA1P27694 CPDP1-201ENST00000579660 283 ntBASIC1.77□□□□□ -2.13
RPA1P27694 MIR4742-201ENST00000581069 85 ntBASIC1.77□□□□□ -2.13
RPA1P27694 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.77□□□□□ -2.13
RPA1P27694 AP001836.1-201ENST00000604675 523 ntBASIC1.77□□□□□ -2.13
RPA1P27694 PCGEM1.1-201ENST00000613431 131 ntBASIC1.77□□□□□ -2.13
RPA1P27694 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPA1P27694 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RPA1P27694 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
RPA1P27694 Y_RNA.160-201ENST00000363677 92 ntBASIC1.76□□□□□ -2.13
RPA1P27694 SNORD116-11-201ENST00000383882 92 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AP000275.1-201ENST00000411943 390 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.76□□□□□ -2.13
RPA1P27694 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.76□□□□□ -2.13
RPA1P27694 AC108210.2-201ENST00000503681 201 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC025465.4-201ENST00000513422 638 ntBASIC1.76□□□□□ -2.13
RPA1P27694 RNU6-612P-201ENST00000516909 102 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.76□□□□□ -2.13
RPA1P27694 AC016256.1-201ENST00000547971 354 ntBASIC1.76□□□□□ -2.13
RPA1P27694 EIF4A1P12-201ENST00000551910 141 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC109446.1-201ENST00000566172 220 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.76□□□□□ -2.13
RPA1P27694 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
RPA1P27694 AC023043.2-201ENST00000589678 1026 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC078795.3-201ENST00000602913 472 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC025754.2-201ENST00000606491 432 ntBASIC1.76□□□□□ -2.13
RPA1P27694 AC005520.5-201ENST00000613926 164 ntBASIC1.76□□□□□ -2.13
RPA1P27694 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.76□□□□□ -2.13
RPA1P27694 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.76□□□□□ -2.13
RPA1P27694 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.76□□□□□ -2.13
RPA1P27694 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.76□□□□□ -2.13
RPA1P27694 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPA1P27694 RNU6-661P-201ENST00000362409 107 ntBASIC1.75□□□□□ -2.13
RPA1P27694 Y_RNA.279-201ENST00000364763 95 ntBASIC1.75□□□□□ -2.13
RPA1P27694 Y_RNA.530-201ENST00000384587 101 ntBASIC1.75□□□□□ -2.13
RPA1P27694 MIR30A-201ENST00000385092 71 ntBASIC1.75□□□□□ -2.13
RPA1P27694 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
RPA1P27694 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.75□□□□□ -2.13
RPA1P27694 RNU6-876P-201ENST00000391295 104 ntBASIC1.75□□□□□ -2.13
RPA1P27694 RNU6-1304P-201ENST00000411374 106 ntBASIC1.75□□□□□ -2.13
RPA1P27694 snoU13.6-201ENST00000458785 104 ntBASIC1.75□□□□□ -2.13
RPA1P27694 RPL9P9-202ENST00000466501 579 ntBASIC1.75□□□□□ -2.13
RPA1P27694 AC116353.2-201ENST00000505332 712 ntBASIC1.75□□□□□ -2.13
RPA1P27694 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.75□□□□□ -2.13
RPA1P27694 AL117351.2-201ENST00000513571 157 ntBASIC1.75□□□□□ -2.13
RPA1P27694 MIR449C-201ENST00000516047 92 ntBASIC1.75□□□□□ -2.13
RPA1P27694 Y_RNA.682-201ENST00000516457 100 ntBASIC1.75□□□□□ -2.13
RPA1P27694 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.75□□□□□ -2.13
RPA1P27694 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.75□□□□□ -2.13
RPA1P27694 AC026371.1-201ENST00000551867 419 ntBASIC1.75□□□□□ -2.13
RPA1P27694 AC010928.2-201ENST00000588017 287 ntBASIC1.75□□□□□ -2.13
RPA1P27694 BNIP3P10-201ENST00000605360 577 ntBASIC1.75□□□□□ -2.13
RPA1P27694 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPA1P27694 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPA1P27694 SNORD50.1-201ENST00000362987 71 ntBASIC1.74□□□□□ -2.13
RPA1P27694 Y_RNA.157-201ENST00000363638 102 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNU6-438P-201ENST00000365561 103 ntBASIC1.74□□□□□ -2.13
RPA1P27694 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
RPA1P27694 Y_RNA.573-201ENST00000384763 105 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNA5SP213-201ENST00000391031 106 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNA5SP100-201ENST00000410903 110 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNA5SP59-201ENST00000410922 110 ntBASIC1.74□□□□□ -2.13
RPA1P27694 AC138393.2-201ENST00000414742 246 ntBASIC1.74□□□□□ -2.13
RPA1P27694 Z82205.1-201ENST00000428456 297 ntBASIC1.74□□□□□ -2.13
RPA1P27694 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
RPA1P27694 HMGN1P12-201ENST00000499125 195 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNU6-507P-201ENST00000516045 100 ntBASIC1.74□□□□□ -2.13
RPA1P27694 RNU6-566P-201ENST00000516790 107 ntBASIC1.74□□□□□ -2.13
RPA1P27694 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.74□□□□□ -2.13
RPA1P27694 BX248123.2-201ENST00000606318 124 ntBASIC1.74□□□□□ -2.13
RPA1P27694 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.74□□□□□ -2.13
RPA1P27694 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
RPA1P27694 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.74□□□□□ -2.13
RPA1P27694 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.74□□□□□ -2.13
RPA1P27694 RNY3P14-201ENST00000384309 102 ntBASIC1.73□□□□□ -2.13
RPA1P27694 RNU6-373P-201ENST00000411247 98 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.73□□□□□ -2.13
RPA1P27694 ARL5AP1-201ENST00000418991 388 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
RPA1P27694 FO393415.2-201ENST00000480085 343 ntBASIC1.73□□□□□ -2.13
RPA1P27694 RNA5SP454-201ENST00000517231 127 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
RPA1P27694 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.73□□□□□ -2.13
RPA1P27694 MIR4524B-201ENST00000581569 115 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AC100830.2-201ENST00000581636 240 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AL133215.3-201ENST00000609801 448 ntBASIC1.73□□□□□ -2.13
RPA1P27694 uc_338.5-201ENST00000611839 155 ntBASIC1.73□□□□□ -2.13
RPA1P27694 AL590240.4-201ENST00000616908 390 ntBASIC1.73□□□□□ -2.13
RPA1P27694 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
RPA1P27694 Y_RNA.48-201ENST00000362710 103 ntBASIC1.72□□□□□ -2.13
RPA1P27694 RNU6-562P-201ENST00000362731 107 ntBASIC1.72□□□□□ -2.13
RPA1P27694 Y_RNA.123-201ENST00000363338 102 ntBASIC1.72□□□□□ -2.13
RPA1P27694 SNORD31B-201ENST00000364977 69 ntBASIC1.72□□□□□ -2.13
RPA1P27694 SNORD81.2-201ENST00000365153 76 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms