Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
MMP8P22894 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.62□□□□□ -1.99
MMP8P22894 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
MMP8P22894 SCARNA4.1-201ENST00000628597 123 ntBASIC2.62□□□□□ -1.99
MMP8P22894 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MMP8P22894 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
MMP8P22894 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MMP8P22894 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-1301P-201ENST00000362724 104 ntBASIC2.61□□□□□ -1.99
MMP8P22894 SNORD115-8-201ENST00000363856 82 ntBASIC2.61□□□□□ -1.99
MMP8P22894 SNORD115-38-201ENST00000365037 82 ntBASIC2.61□□□□□ -1.99
MMP8P22894 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-26P-201ENST00000383985 107 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-926P-201ENST00000384075 107 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-318P-201ENST00000384283 103 ntBASIC2.61□□□□□ -1.99
MMP8P22894 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MMP8P22894 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-1001P-201ENST00000411265 100 ntBASIC2.61□□□□□ -1.99
MMP8P22894 MTCO3P19-201ENST00000415864 321 ntBASIC2.61□□□□□ -1.99
MMP8P22894 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.61□□□□□ -1.99
MMP8P22894 AC096638.1-201ENST00000444678 216 ntBASIC2.61□□□□□ -1.99
MMP8P22894 U8.20-201ENST00000459445 131 ntBASIC2.61□□□□□ -1.99
MMP8P22894 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.61□□□□□ -1.99
MMP8P22894 AC010469.2-201ENST00000496412 480 ntBASIC2.61□□□□□ -1.99
MMP8P22894 CKS1BP2-201ENST00000497342 240 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.61□□□□□ -1.99
MMP8P22894 RNU6-911P-201ENST00000516523 104 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RNA5SP54-201ENST00000516951 92 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AC091144.1-201ENST00000519573 138 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.61□□□□□ -1.99
MMP8P22894 DEFB131C-201ENST00000528817 165 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AP002770.2-201ENST00000543613 532 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AC125232.2-201ENST00000592457 143 ntBASIC2.61□□□□□ -1.99
MMP8P22894 RPS29P30-201ENST00000600975 111 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AL356280.1-201ENST00000603614 379 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AC136443.5-201ENST00000603741 370 ntBASIC2.61□□□□□ -1.99
MMP8P22894 U4.3-201ENST00000621047 82 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AL078596.1-201ENST00000624856 447 ntBASIC2.61□□□□□ -1.99
MMP8P22894 AC243829.7-201ENST00000633081 225 ntBASIC2.61□□□□□ -1.99
MMP8P22894 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.61□□□□□ -1.99
MMP8P22894 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MMP8P22894 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
MMP8P22894 Y_RNA.153-201ENST00000363615 91 ntBASIC2.6□□□□□ -1.99
MMP8P22894 RNU6-137P-201ENST00000363680 108 ntBASIC2.6□□□□□ -1.99
MMP8P22894 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
MMP8P22894 RNU1-109P-201ENST00000383960 147 ntBASIC2.6□□□□□ -1.99
MMP8P22894 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
MMP8P22894 MIR29B2-201ENST00000385055 81 ntBASIC2.6□□□□□ -1.99
MMP8P22894 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.6□□□□□ -1.99
MMP8P22894 AC010095.1-201ENST00000443543 144 ntBASIC2.6□□□□□ -1.99
MMP8P22894 SNORA59A-201ENST00000459326 152 ntBASIC2.6□□□□□ -1.99
MMP8P22894 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.6□□□□□ -1.99
MMP8P22894 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.6□□□□□ -1.99
MMP8P22894 RNU6-965P-201ENST00000516721 96 ntBASIC2.6□□□□□ -1.99
MMP8P22894 Y_RNA.721-201ENST00000517207 102 ntBASIC2.6□□□□□ -1.99
MMP8P22894 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.6□□□□□ -1.99
MMP8P22894 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.6□□□□□ -1.99
MMP8P22894 MIR5739-201ENST00000619803 80 ntBASIC2.6□□□□□ -1.99
MMP8P22894 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
MMP8P22894 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -1.99
MMP8P22894 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
MMP8P22894 BX322639.1-202ENST00000423987 2213 ntBASIC2.59□□□□□ -1.99
MMP8P22894 Y_RNA.27-201ENST00000362540 103 ntBASIC2.59□□□□□ -1.99
MMP8P22894 RNU6-727P-201ENST00000363592 107 ntBASIC2.59□□□□□ -1.99
MMP8P22894 RNA5SP68-201ENST00000363885 119 ntBASIC2.59□□□□□ -1.99
MMP8P22894 DPH3P2-201ENST00000422618 250 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP8P22894 MTND5P22-201ENST00000458380 195 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AC080013.2-201ENST00000460866 323 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP8P22894 MIR2355-201ENST00000517199 87 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.59□□□□□ -1.99
MMP8P22894 AC022616.4-201ENST00000522985 181 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP8P22894 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP8P22894 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.59□□□□□ -1.99
MMP8P22894 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
MMP8P22894 AC011476.5-201ENST00000615594 130 ntBASIC2.59□□□□□ -1.99
MMP8P22894 MIR6852-201ENST00000621699 66 ntBASIC2.59□□□□□ -1.99
MMP8P22894 U6.92-201ENST00000636464 89 ntBASIC2.59□□□□□ -1.99
MMP8P22894 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.59□□□□□ -2
MMP8P22894 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
MMP8P22894 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
MMP8P22894 RNU6-280P-201ENST00000364145 104 ntBASIC2.58□□□□□ -2
MMP8P22894 SNORD32B-201ENST00000364460 84 ntBASIC2.58□□□□□ -2
MMP8P22894 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
MMP8P22894 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
MMP8P22894 SNORA11.2-201ENST00000408318 127 ntBASIC2.58□□□□□ -2
MMP8P22894 AC004866.1-201ENST00000411748 78 ntBASIC2.58□□□□□ -2
MMP8P22894 AL161788.1-201ENST00000441805 169 ntBASIC2.58□□□□□ -2
MMP8P22894 AC004386.2-201ENST00000441858 148 ntBASIC2.58□□□□□ -2
MMP8P22894 AC093852.1-201ENST00000503587 266 ntBASIC2.58□□□□□ -2
MMP8P22894 RNU6-397P-201ENST00000516226 104 ntBASIC2.58□□□□□ -2
MMP8P22894 RNU2-44P-201ENST00000516795 194 ntBASIC2.58□□□□□ -2
MMP8P22894 Y_RNA.715-201ENST00000517082 110 ntBASIC2.58□□□□□ -2
MMP8P22894 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
MMP8P22894 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.58□□□□□ -2
MMP8P22894 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.58□□□□□ -2
MMP8P22894 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms