Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RBMY2UP-201ENST00000453474 324 ntBASIC4.1□□□□□ -1.75
RFX1P22670 RNU7-14P-201ENST00000459331 62 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AC080013.2-201ENST00000460866 323 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AC114982.1-201ENST00000469402 321 ntBASIC4.1□□□□□ -1.75
RFX1P22670 RAC1P2-201ENST00000511164 579 ntBASIC4.1□□□□□ -1.75
RFX1P22670 SNORA70.12-201ENST00000516084 153 ntBASIC4.1□□□□□ -1.75
RFX1P22670 SUMO2P18-201ENST00000518873 252 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX1P22670 AL133393.1-201ENST00000603277 287 ntBASIC4.1□□□□□ -1.75
RFX1P22670 U2.22-201ENST00000636441 106 ntBASIC4.1□□□□□ -1.75
RFX1P22670 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX1P22670 AL159152.1-201ENST00000635019 2587 ntBASIC4.09□□□□□ -1.75
RFX1P22670 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX1P22670 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX1P22670 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX1P22670 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX1P22670 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX1P22670 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX1P22670 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RFX1P22670 Y_RNA.111-201ENST00000363248 100 ntBASIC4.09□□□□□ -1.75
RFX1P22670 Y_RNA.571-201ENST00000384753 98 ntBASIC4.09□□□□□ -1.75
RFX1P22670 MIR218-2-201ENST00000385006 110 ntBASIC4.09□□□□□ -1.75
RFX1P22670 RPL30P4-201ENST00000429309 333 ntBASIC4.09□□□□□ -1.75
RFX1P22670 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX1P22670 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX1P22670 AC104619.4-201ENST00000510773 249 ntBASIC4.09□□□□□ -1.75
RFX1P22670 AC109329.2-201ENST00000519658 482 ntBASIC4.09□□□□□ -1.75
RFX1P22670 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX1P22670 AC087499.8-201ENST00000578406 226 ntBASIC4.09□□□□□ -1.75
RFX1P22670 MIR3144-201ENST00000579460 79 ntBASIC4.09□□□□□ -1.75
RFX1P22670 MIR7515-201ENST00000637837 67 ntBASIC4.09□□□□□ -1.75
RFX1P22670 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.09□□□□□ -1.76
RFX1P22670 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RFX1P22670 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX1P22670 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX1P22670 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX1P22670 RNU6-944P-201ENST00000364023 107 ntBASIC4.08□□□□□ -1.76
RFX1P22670 Y_RNA.456-201ENST00000384232 111 ntBASIC4.08□□□□□ -1.76
RFX1P22670 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RFX1P22670 RNA5SP424-201ENST00000390988 115 ntBASIC4.08□□□□□ -1.76
RFX1P22670 RNU6-1135P-201ENST00000411083 103 ntBASIC4.08□□□□□ -1.76
RFX1P22670 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX1P22670 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX1P22670 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX1P22670 RN7SKP18-201ENST00000516005 275 ntBASIC4.08□□□□□ -1.76
RFX1P22670 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX1P22670 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX1P22670 SNORA62.6-201ENST00000606322 83 ntBASIC4.08□□□□□ -1.76
RFX1P22670 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RFX1P22670 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RFX1P22670 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX1P22670 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 Y_RNA.7-201ENST00000362352 102 ntBASIC4.07□□□□□ -1.76
RFX1P22670 SNORD31B-201ENST00000364977 69 ntBASIC4.07□□□□□ -1.76
RFX1P22670 RNY1P5-201ENST00000383890 115 ntBASIC4.07□□□□□ -1.76
RFX1P22670 Y_RNA.441-201ENST00000384123 112 ntBASIC4.07□□□□□ -1.76
RFX1P22670 RNU6-804P-201ENST00000384286 107 ntBASIC4.07□□□□□ -1.76
RFX1P22670 SNORA26.5-201ENST00000391215 123 ntBASIC4.07□□□□□ -1.76
RFX1P22670 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX1P22670 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX1P22670 AC146507.2-201ENST00000460608 476 ntBASIC4.07□□□□□ -1.76
RFX1P22670 MIR449C-201ENST00000516047 92 ntBASIC4.07□□□□□ -1.76
RFX1P22670 RN7SKP83-201ENST00000516512 178 ntBASIC4.07□□□□□ -1.76
RFX1P22670 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX1P22670 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RFX1P22670 MIR4753-201ENST00000585119 83 ntBASIC4.07□□□□□ -1.76
RFX1P22670 AC099778.2-201ENST00000610904 211 ntBASIC4.07□□□□□ -1.76
RFX1P22670 AC104465.1-201ENST00000611365 139 ntBASIC4.07□□□□□ -1.76
RFX1P22670 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RFX1P22670 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.07□□□□□ -1.76
RFX1P22670 SCARNA15.3-201ENST00000626315 122 ntBASIC4.07□□□□□ -1.76
RFX1P22670 SCARNA4.1-201ENST00000628597 123 ntBASIC4.07□□□□□ -1.76
RFX1P22670 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX1P22670 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX1P22670 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX1P22670 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFX1P22670 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX1P22670 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX1P22670 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFX1P22670 AC110774.1-201ENST00000623567 2018 ntBASIC4.06□□□□□ -1.76
RFX1P22670 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RFX1P22670 RNU6-975P-201ENST00000384296 105 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX1P22670 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX1P22670 RNA5SP208-201ENST00000516156 78 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AC105245.1-201ENST00000581934 244 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AC069294.1-201ENST00000608397 350 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AC108706.1-201ENST00000611053 297 ntBASIC4.06□□□□□ -1.76
RFX1P22670 AC013791.1-201ENST00000616619 62 ntBASIC4.06□□□□□ -1.76
RFX1P22670 MIR5739-201ENST00000619803 80 ntBASIC4.06□□□□□ -1.76
RFX1P22670 U6.105-201ENST00000637379 88 ntBASIC4.06□□□□□ -1.76
RFX1P22670 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX1P22670 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX1P22670 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX1P22670 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms