Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.86□□□□□ -1.79
RARAP10276 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
RARAP10276 AP002884.2-201ENST00000471647 395 ntBASIC3.86□□□□□ -1.79
RARAP10276 HSPE1P18-201ENST00000517602 280 ntBASIC3.86□□□□□ -1.79
RARAP10276 AP001328.1-201ENST00000528550 176 ntBASIC3.86□□□□□ -1.79
RARAP10276 AP000867.2-201ENST00000532468 320 ntBASIC3.86□□□□□ -1.79
RARAP10276 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RARAP10276 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RARAP10276 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RARAP10276 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.86□□□□□ -1.79
RARAP10276 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
RARAP10276 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RARAP10276 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.86□□□□□ -1.79
RARAP10276 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RARAP10276 snoU2_19.1-201ENST00000362361 80 ntBASIC3.85□□□□□ -1.79
RARAP10276 U8.7-201ENST00000364940 136 ntBASIC3.85□□□□□ -1.79
RARAP10276 Y_RNA.393-201ENST00000383936 102 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU6-198P-201ENST00000384258 104 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU1-57P-201ENST00000384491 166 ntBASIC3.85□□□□□ -1.79
RARAP10276 Y_RNA.521-201ENST00000384560 114 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU6-588P-201ENST00000410281 105 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU4-43P-201ENST00000410628 137 ntBASIC3.85□□□□□ -1.79
RARAP10276 HSPE1P21-201ENST00000438283 308 ntBASIC3.85□□□□□ -1.79
RARAP10276 RPS27P1-201ENST00000450552 247 ntBASIC3.85□□□□□ -1.79
RARAP10276 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.85□□□□□ -1.79
RARAP10276 RPS29P2-201ENST00000479278 136 ntBASIC3.85□□□□□ -1.79
RARAP10276 YWHAEP4-201ENST00000505390 198 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU2-56P-201ENST00000516826 190 ntBASIC3.85□□□□□ -1.79
RARAP10276 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
RARAP10276 VN1R85P-201ENST00000601587 426 ntBASIC3.85□□□□□ -1.79
RARAP10276 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
RARAP10276 U7.2-201ENST00000607576 63 ntBASIC3.85□□□□□ -1.79
RARAP10276 AC002076.2-201ENST00000617362 122 ntBASIC3.85□□□□□ -1.79
RARAP10276 MIR548AY-201ENST00000617669 107 ntBASIC3.85□□□□□ -1.79
RARAP10276 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.85□□□□□ -1.79
RARAP10276 AL513302.2-201ENST00000562313 1842 ntBASIC3.85□□□□□ -1.79
RARAP10276 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RARAP10276 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.85□□□□□ -1.79
RARAP10276 AL391516.1-201ENST00000554380 2449 ntBASIC3.84□□□□□ -1.79
RARAP10276 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RARAP10276 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RARAP10276 Y_RNA.251-201ENST00000364551 99 ntBASIC3.84□□□□□ -1.79
RARAP10276 MIR586-201ENST00000385035 97 ntBASIC3.84□□□□□ -1.79
RARAP10276 MIR483-201ENST00000385070 76 ntBASIC3.84□□□□□ -1.79
RARAP10276 RNU6-750P-201ENST00000390946 107 ntBASIC3.84□□□□□ -1.79
RARAP10276 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.84□□□□□ -1.79
RARAP10276 RPS4XP2-201ENST00000458402 793 ntBASIC3.84□□□□□ -1.79
RARAP10276 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
RARAP10276 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.84□□□□□ -1.79
RARAP10276 RNU7-115P-201ENST00000516433 55 ntBASIC3.84□□□□□ -1.79
RARAP10276 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.84□□□□□ -1.79
RARAP10276 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.84□□□□□ -1.79
RARAP10276 AC106785.1-201ENST00000565935 262 ntBASIC3.84□□□□□ -1.79
RARAP10276 MIR3944-201ENST00000581277 108 ntBASIC3.84□□□□□ -1.79
RARAP10276 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RARAP10276 uc_338.32-201ENST00000615087 172 ntBASIC3.84□□□□□ -1.79
RARAP10276 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.84□□□□□ -1.79
RARAP10276 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.84□□□□□ -1.79
RARAP10276 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RARAP10276 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 Y_RNA.124-201ENST00000363339 93 ntBASIC3.83□□□□□ -1.8
RARAP10276 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
RARAP10276 RNU6-1305P-201ENST00000364353 104 ntBASIC3.83□□□□□ -1.8
RARAP10276 HSPE1P26-201ENST00000405341 275 ntBASIC3.83□□□□□ -1.8
RARAP10276 RN7SKP156-201ENST00000410308 342 ntBASIC3.83□□□□□ -1.8
RARAP10276 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
RARAP10276 AL358232.1-201ENST00000448030 501 ntBASIC3.83□□□□□ -1.8
RARAP10276 HSPE1P13-201ENST00000451143 297 ntBASIC3.83□□□□□ -1.8
RARAP10276 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.83□□□□□ -1.8
RARAP10276 RNU7-107P-201ENST00000459121 61 ntBASIC3.83□□□□□ -1.8
RARAP10276 AC112771.1-201ENST00000463581 102 ntBASIC3.83□□□□□ -1.8
RARAP10276 AC117454.1-201ENST00000491120 168 ntBASIC3.83□□□□□ -1.8
RARAP10276 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
RARAP10276 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.83□□□□□ -1.8
RARAP10276 MIR5685-201ENST00000579080 79 ntBASIC3.83□□□□□ -1.8
RARAP10276 MIR5187-201ENST00000583479 76 ntBASIC3.83□□□□□ -1.8
RARAP10276 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.83□□□□□ -1.8
RARAP10276 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
RARAP10276 AC068647.2-201ENST00000637380 353 ntBASIC3.83□□□□□ -1.8
RARAP10276 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
RARAP10276 AC007496.3-201ENST00000624987 3443 ntBASIC3.83□□□□□ -1.8
RARAP10276 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RARAP10276 AL353746.1-201ENST00000566293 6881 ntBASIC3.82□□□□□ -1.8
RARAP10276 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RARAP10276 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RARAP10276 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RARAP10276 SNORD114-7-201ENST00000362520 77 ntBASIC3.82□□□□□ -1.8
RARAP10276 SNORD46.1-201ENST00000364139 104 ntBASIC3.82□□□□□ -1.8
RARAP10276 RNY3P5-201ENST00000384127 102 ntBASIC3.82□□□□□ -1.8
RARAP10276 MIR634-201ENST00000385208 97 ntBASIC3.82□□□□□ -1.8
RARAP10276 SNORA75.5-201ENST00000391291 81 ntBASIC3.82□□□□□ -1.8
RARAP10276 MIR1185-2-201ENST00000408687 86 ntBASIC3.82□□□□□ -1.8
RARAP10276 SNORA36B-201ENST00000410438 131 ntBASIC3.82□□□□□ -1.8
RARAP10276 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
RARAP10276 RNU7-170P-201ENST00000459303 61 ntBASIC3.82□□□□□ -1.8
RARAP10276 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms