Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 AC022616.8-201ENST00000533569 253 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 MIR4431-201ENST00000579990 94 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 MIR3136-201ENST00000583498 78 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 MTND5P35-201ENST00000557537 1720 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 SNORD114-19-201ENST00000363072 75 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 SNORD6-201ENST00000365444 73 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-80P-201ENST00000384195 107 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 MIR549A-201ENST00000385268 96 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 MIR513C-201ENST00000401352 84 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 ELOCP21-201ENST00000412558 336 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 AC112220.1-201ENST00000434628 355 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 HMGN2P20-201ENST00000437531 273 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 RPS20P10-201ENST00000451209 253 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-711P-201ENST00000517255 106 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSB-PGBD3P0DP91 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-1010P-201ENST00000362757 107 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-899P-201ENST00000363947 107 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.420-201ENST00000384043 110 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.498-201ENST00000384460 102 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 MIR767-201ENST00000390228 109 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 MIR1289-1-201ENST00000408836 144 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RPS29P31-201ENST00000446147 164 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 PDCD5P2-201ENST00000507570 312 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RNU5F-2P-201ENST00000516066 82 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 DNAJC19P2-201ENST00000593340 302 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CSB-PGBD3P0DP91 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 MIR422A-201ENST00000362286 90 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-529P-201ENST00000363383 104 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNU1-105P-201ENST00000363470 161 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 snoU2_19.4-201ENST00000364329 80 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-578P-201ENST00000390980 103 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNU2-54P-201ENST00000410299 190 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 AC006445.1-201ENST00000491925 405 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 AC025445.1-201ENST00000502728 300 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 RNA5SP54-201ENST00000516951 92 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 AC069294.1-201ENST00000608397 350 ntBASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSB-PGBD3P0DP91 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 RNU4-10P-201ENST00000364383 140 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.329-201ENST00000365209 107 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 AC009963.1-201ENST00000417265 157 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 RPL23AP62-201ENST00000463396 453 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 CYP4A27P-201ENST00000567218 190 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 MIR4744-201ENST00000581563 82 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 MFSD8-233ENST00000641482 4860 ntBASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CSB-PGBD3P0DP91 TNPO1P3-201ENST00000436471 2662 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AL356274.2-201ENST00000624379 3752 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.43-201ENST00000362670 111 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.179-201ENST00000363844 90 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 SNORA14A-201ENST00000364773 135 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 MIR539-201ENST00000365690 78 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AL135790.2-201ENST00000437701 267 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC107027.2-201ENST00000512197 115 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC021269.2-201ENST00000532318 330 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC009127.3-201ENST00000570531 403 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AC006504.1-201ENST00000562493 3666 ntBASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CSB-PGBD3P0DP91 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms