Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL590556.1-201ENST00000423231 483 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 RNA5SP57-201ENST00000459463 123 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.78□□□□□ -2.29
COL4A1P02462 RNU2-69P-201ENST00000516061 100 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORA14.1-201ENST00000516113 141 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A1P02462 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.78□□□□□ -2.29
COL4A1P02462 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A1P02462 BNIP3P16-201ENST00000589779 534 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 AC009229.3-201ENST00000608056 282 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 U2.17-201ENST00000611454 95 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.78□□□□□ -2.29
COL4A1P02462 AC097372.5-201ENST00000623665 376 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 AC022418.1-201ENST00000624118 445 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 OR5AK4P-201ENST00000635912 903 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 LINC02555-201ENST00000563933 1951 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 SNORD32A-201ENST00000364805 84 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RNU6-827P-201ENST00000365553 106 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RNU6-348P-201ENST00000384386 107 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RNU6-1158P-201ENST00000391167 107 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AL606923.1-201ENST00000406616 190 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AL357139.1-201ENST00000407792 426 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RNA5SP501-201ENST00000410990 112 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RN7SKP142-201ENST00000411236 328 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.77□□□□□ -2.29
COL4A1P02462 SNAP23P1-201ENST00000433229 246 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 HSPE1P21-201ENST00000438283 308 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 TPTE2P5-203ENST00000458118 728 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 OR2A41P-201ENST00000473586 105 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AL163973.1-201ENST00000484753 577 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AC010409.1-201ENST00000487382 476 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 RNA5SP401-201ENST00000515920 127 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AC069113.1-201ENST00000517763 267 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 OSBPL9P5-201ENST00000542581 171 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.77□□□□□ -2.29
COL4A1P02462 AC090517.1-201ENST00000569307 266 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.77□□□□□ -2.29
COL4A1P02462 AL078605.1-201ENST00000603529 500 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 CYP2C61P-201ENST00000604072 290 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AP000654.2-201ENST00000605633 586 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AC002044.1-201ENST00000606707 158 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AP001596.2-201ENST00000608410 312 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AC017083.3-201ENST00000609955 700 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AC130454.1-201ENST00000622948 401 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 AL450472.1-202ENST00000637286 180 ntBASIC0.77□□□□□ -2.29
COL4A1P02462 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL4A1P02462 RNU6-862P-201ENST00000362804 105 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 Y_RNA.77-201ENST00000362962 107 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 RNU6-336P-201ENST00000364891 107 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 SNORD1A-201ENST00000364968 72 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 SNORA75-201ENST00000384158 137 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 SNORD116-1-201ENST00000384335 95 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 Y_RNA.481-201ENST00000384373 102 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 SNORA8-201ENST00000384574 139 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 SNORA12.2-201ENST00000391040 156 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC139712.2-201ENST00000424302 339 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 RPL23AP95-201ENST00000426806 265 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 MTCO2P19-201ENST00000427513 598 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 MTCO2P3-201ENST00000442543 421 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.76□□□□□ -2.29
COL4A1P02462 AC079140.3-201ENST00000511111 550 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 RNU6-1069P-201ENST00000516612 133 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.76□□□□□ -2.29
COL4A1P02462 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A1P02462 RNU6-323P-201ENST00000521915 107 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.76□□□□□ -2.29
COL4A1P02462 AL137161.1-201ENST00000532231 390 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 EIF4A1P12-201ENST00000551910 141 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 HIF1AP1-201ENST00000553642 175 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A1P02462 MIR3169-201ENST00000578032 83 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC078795.3-201ENST00000602913 472 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC016925.2-201ENST00000605108 242 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 RNU6-85P-201ENST00000605989 107 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 RN7SKP299-201ENST00000606679 301 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC073114.1-201ENST00000612027 490 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 Z99129.1-201ENST00000612510 255 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 HULC.1-201ENST00000612720 240 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 AC005520.5-201ENST00000613926 164 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 MIR3974-201ENST00000637126 96 ntBASIC0.76□□□□□ -2.29
COL4A1P02462 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL4A1P02462 MIR26B-201ENST00000362251 77 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU6-545P-201ENST00000362681 104 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 Y_RNA.99-201ENST00000363138 105 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU6-1322P-201ENST00000364309 107 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
COL4A1P02462 DEFB108C-201ENST00000400154 252 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MTCYBP2-201ENST00000407745 171 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU2-66P-201ENST00000410650 161 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A1P02462 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 AL358934.1-201ENST00000432346 324 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MTCO1P19-201ENST00000443487 500 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC098826.2-201ENST00000452011 651 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms