Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR128-1-201ENST00000384921 82 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 AL356535.1-201ENST00000440335 398 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 AP001486.1-201ENST00000463339 476 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 RNA5SP153-201ENST00000516498 76 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 RNU6-1337P-201ENST00000516525 95 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 EIF4A1P12-201ENST00000551910 141 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 POLR3GP1-201ENST00000594073 261 ntBASIC4.41□□□□□ -1.7
ALDH1A1P00352 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ALDH1A1P00352 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ALDH1A1P00352 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.41□□□□□ -1.7
ALDH1A1P00352 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ALDH1A1P00352 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ALDH1A1P00352 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
ALDH1A1P00352 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ALDH1A1P00352 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.7
ALDH1A1P00352 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.4□□□□□ -1.7
ALDH1A1P00352 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ALDH1A1P00352 Y_RNA.52-201ENST00000362760 96 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 DYNLT3P1-201ENST00000378574 347 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 SNORA18.2-201ENST00000383865 132 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 MIR490-201ENST00000384865 128 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 MIR548B-201ENST00000385247 97 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 RNU6-440P-201ENST00000390882 105 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 MIR1263-201ENST00000408324 86 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 RPL23AP94-201ENST00000512518 302 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 RNU6-970P-201ENST00000516312 107 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 AC022695.1-201ENST00000522089 237 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.4□□□□□ -1.71
ALDH1A1P00352 AC097639.2-201ENST00000603159 172 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 AC093732.2-201ENST00000607950 274 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 MIR8057-201ENST00000620957 69 ntBASIC4.4□□□□□ -1.71
ALDH1A1P00352 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.4□□□□□ -1.71
ALDH1A1P00352 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.4□□□□□ -1.71
ALDH1A1P00352 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ALDH1A1P00352 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ALDH1A1P00352 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 AL159152.1-201ENST00000635019 2587 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 RNU6-600P-201ENST00000362524 99 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RNU1-33P-201ENST00000364249 162 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RNU4-41P-201ENST00000364426 143 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RNU6-820P-201ENST00000384273 107 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 Y_RNA.528-201ENST00000384575 108 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RNU6-1152P-201ENST00000384576 107 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RPL23AP82-202ENST00000427528 469 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 AC109327.2-201ENST00000448339 378 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 RPL23AP7-203ENST00000449021 469 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 AL021397.1-201ENST00000451806 248 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 CENPBD1P1-201ENST00000464061 469 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 SRIP1-201ENST00000489235 288 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 AC021739.1-201ENST00000559631 174 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 MIR7851-201ENST00000610611 160 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 MIR6852-201ENST00000621699 66 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 AC140113.4-201ENST00000622087 222 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 AC058791.1-201ENST00000608412 3198 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 AL672167.1-203ENST00000641299 2975 ntBASIC4.39□□□□□ -1.71
ALDH1A1P00352 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALDH1A1P00352 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.39□□□□□ -1.71
ALDH1A1P00352 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU6-1014P-201ENST00000383940 103 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU6-1181P-201ENST00000384191 106 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 Y_RNA.544-201ENST00000384650 113 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNY1P7-201ENST00000384743 110 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 MIR570-201ENST00000384917 97 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 MIR29B2-201ENST00000385055 81 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 MIR891A-201ENST00000401237 79 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RN7SKP167-201ENST00000411047 285 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 HMGN2P20-201ENST00000437531 273 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 AL645939.1-201ENST00000453429 797 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RPL36AP21-201ENST00000490372 323 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RPL23AP54-201ENST00000495129 419 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNA5SP281-201ENST00000516504 135 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU2-44P-201ENST00000516795 194 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU7-116P-201ENST00000516940 62 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU1-104P-201ENST00000517280 175 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 AC025647.1-201ENST00000517879 253 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 AL049861.1-201ENST00000603130 150 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 RNU6-94P-201ENST00000607728 107 ntBASIC4.38□□□□□ -1.71
ALDH1A1P00352 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms