Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
SDC3O75056 UBE2V1P8-201ENST00000437166 265 ntBASIC1.67□□□□□ -2.14
SDC3O75056 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.67□□□□□ -2.14
SDC3O75056 AC016925.1-201ENST00000458303 298 ntBASIC1.67□□□□□ -2.14
SDC3O75056 snoU13.6-201ENST00000458785 104 ntBASIC1.67□□□□□ -2.14
SDC3O75056 TOMM22P6-201ENST00000465035 409 ntBASIC1.67□□□□□ -2.14
SDC3O75056 MTCYBP18-201ENST00000501056 747 ntBASIC1.67□□□□□ -2.14
SDC3O75056 Y_RNA.673-201ENST00000516306 88 ntBASIC1.67□□□□□ -2.14
SDC3O75056 RNU5F-4P-201ENST00000516581 114 ntBASIC1.67□□□□□ -2.14
SDC3O75056 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.67□□□□□ -2.14
SDC3O75056 MRPS36P4-201ENST00000534436 298 ntBASIC1.67□□□□□ -2.14
SDC3O75056 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.67□□□□□ -2.14
SDC3O75056 AC090517.1-201ENST00000569307 266 ntBASIC1.67□□□□□ -2.14
SDC3O75056 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.67□□□□□ -2.14
SDC3O75056 MIR3169-201ENST00000578032 83 ntBASIC1.67□□□□□ -2.14
SDC3O75056 AC090617.10-201ENST00000624308 134 ntBASIC1.67□□□□□ -2.14
SDC3O75056 CBX3P1-201ENST00000325243 554 ntBASIC1.66□□□□□ -2.14
SDC3O75056 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SDC3O75056 MIR340-201ENST00000362125 95 ntBASIC1.66□□□□□ -2.14
SDC3O75056 SNORD114-6-201ENST00000364393 72 ntBASIC1.66□□□□□ -2.14
SDC3O75056 Y_RNA.453-201ENST00000384223 109 ntBASIC1.66□□□□□ -2.14
SDC3O75056 SNORA48.1-201ENST00000390879 135 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC009161.1-201ENST00000417306 376 ntBASIC1.66□□□□□ -2.14
SDC3O75056 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
SDC3O75056 DAP3P1-201ENST00000441522 278 ntBASIC1.66□□□□□ -2.14
SDC3O75056 OR2AQ1P-201ENST00000451972 200 ntBASIC1.66□□□□□ -2.14
SDC3O75056 PCMTD1P1-201ENST00000455560 355 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AF186996.7-201ENST00000492781 209 ntBASIC1.66□□□□□ -2.14
SDC3O75056 RPS23P5-201ENST00000495419 428 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.66□□□□□ -2.14
SDC3O75056 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
SDC3O75056 RNU6-1314P-201ENST00000517139 104 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.66□□□□□ -2.14
SDC3O75056 AC026470.2-201ENST00000561492 181 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC146944.4-201ENST00000602697 718 ntBASIC1.66□□□□□ -2.14
SDC3O75056 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.66□□□□□ -2.14
SDC3O75056 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
SDC3O75056 AC137590.2-201ENST00000619709 240 ntBASIC1.66□□□□□ -2.14
SDC3O75056 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SDC3O75056 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SDC3O75056 RNU6-438P-201ENST00000365561 103 ntBASIC1.65□□□□□ -2.15
SDC3O75056 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.65□□□□□ -2.15
SDC3O75056 SNORD116-11-201ENST00000383882 92 ntBASIC1.65□□□□□ -2.15
SDC3O75056 SNORD115-47-201ENST00000391226 86 ntBASIC1.65□□□□□ -2.15
SDC3O75056 MIR548F1-201ENST00000408667 84 ntBASIC1.65□□□□□ -2.15
SDC3O75056 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AC009310.1-201ENST00000414414 451 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AL590632.1-201ENST00000424289 371 ntBASIC1.65□□□□□ -2.15
SDC3O75056 RNU7-14P-201ENST00000459331 62 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AC007215.1-201ENST00000464893 276 ntBASIC1.65□□□□□ -2.15
SDC3O75056 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.65□□□□□ -2.15
SDC3O75056 AL163540.1-201ENST00000485382 386 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.65□□□□□ -2.15
SDC3O75056 AC011352.1-201ENST00000512300 793 ntBASIC1.65□□□□□ -2.15
SDC3O75056 RNU6-864P-201ENST00000516256 108 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.65□□□□□ -2.15
SDC3O75056 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
SDC3O75056 MIR3976-201ENST00000606807 139 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AC009033.1-201ENST00000624279 431 ntBASIC1.65□□□□□ -2.15
SDC3O75056 AC006026.1-201ENST00000444025 1803 ntBASIC1.65□□□□□ -2.15
SDC3O75056 SNORD50.1-201ENST00000362987 71 ntBASIC1.64□□□□□ -2.15
SDC3O75056 Y_RNA.151-201ENST00000363566 112 ntBASIC1.64□□□□□ -2.15
SDC3O75056 SNORA12.2-201ENST00000391040 156 ntBASIC1.64□□□□□ -2.15
SDC3O75056 AL353572.1-201ENST00000442490 417 ntBASIC1.64□□□□□ -2.15
SDC3O75056 SNRPEP8-201ENST00000442866 260 ntBASIC1.64□□□□□ -2.15
SDC3O75056 AC079354.2-201ENST00000453523 154 ntBASIC1.64□□□□□ -2.15
SDC3O75056 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
SDC3O75056 MTCO2P30-201ENST00000503662 364 ntBASIC1.64□□□□□ -2.15
SDC3O75056 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
SDC3O75056 DEFB131C-201ENST00000528817 165 ntBASIC1.64□□□□□ -2.15
SDC3O75056 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
SDC3O75056 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.64□□□□□ -2.15
SDC3O75056 MIR3662-201ENST00000637030 95 ntBASIC1.64□□□□□ -2.15
SDC3O75056 AC073869.6-201ENST00000640656 341 ntBASIC1.64□□□□□ -2.15
SDC3O75056 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SDC3O75056 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.63□□□□□ -2.15
SDC3O75056 Y_RNA.226-201ENST00000364337 114 ntBASIC1.63□□□□□ -2.15
SDC3O75056 SNORA18.2-201ENST00000383865 132 ntBASIC1.63□□□□□ -2.15
SDC3O75056 RNU6-790P-201ENST00000384479 105 ntBASIC1.63□□□□□ -2.15
SDC3O75056 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SDC3O75056 SNORA67.5-201ENST00000391036 107 ntBASIC1.63□□□□□ -2.15
SDC3O75056 MIR1277-201ENST00000408536 78 ntBASIC1.63□□□□□ -2.15
SDC3O75056 RNU6-1148P-201ENST00000410992 104 ntBASIC1.63□□□□□ -2.15
SDC3O75056 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
SDC3O75056 NCOR1P3-201ENST00000420479 303 ntBASIC1.63□□□□□ -2.15
SDC3O75056 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.63□□□□□ -2.15
SDC3O75056 MTCO1P44-201ENST00000441935 243 ntBASIC1.63□□□□□ -2.15
SDC3O75056 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.63□□□□□ -2.15
SDC3O75056 AC007395.1-201ENST00000451333 677 ntBASIC1.63□□□□□ -2.15
SDC3O75056 AC130509.1-201ENST00000464158 433 ntBASIC1.63□□□□□ -2.15
SDC3O75056 RPL23AP75-201ENST00000491601 451 ntBASIC1.63□□□□□ -2.15
SDC3O75056 AC005840.1-201ENST00000498412 377 ntBASIC1.63□□□□□ -2.15
SDC3O75056 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
SDC3O75056 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.63□□□□□ -2.15
SDC3O75056 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.63□□□□□ -2.15
SDC3O75056 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.63□□□□□ -2.15
SDC3O75056 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms