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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
FAR2P3-204
ENST00000434661
444 nt
TSL 2
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
UBE2V1P8-201
ENST00000437166
265 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
MYCBP2-AS1-203
ENST00000450627
349 nt
TSL 3
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC016925.1-201
ENST00000458303
298 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
snoU13.6-201
ENST00000458785
104 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
TOMM22P6-201
ENST00000465035
409 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
MTCYBP18-201
ENST00000501056
747 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
Y_RNA.673-201
ENST00000516306
88 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
RNU5F-4P-201
ENST00000516581
114 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC099520.1-206
ENST00000523434
486 nt
TSL 3
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
MRPS36P4-201
ENST00000534436
298 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC009754.1-201
ENST00000566282
540 nt
TSL 4
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC090517.1-201
ENST00000569307
266 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC099518.4-202
ENST00000576433
455 nt
TSL 2
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
MIR3169-201
ENST00000578032
83 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
AC090617.10-201
ENST00000624308
134 nt
BASIC
1.67
□□□□□ -2.14
SDC3
O75056
CBX3P1-201
ENST00000325243
554 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
GAGE12B-201
ENST00000361446
117 nt
APPRIS P1
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
MIR340-201
ENST00000362125
95 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
SNORD114-6-201
ENST00000364393
72 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
Y_RNA.453-201
ENST00000384223
109 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
SNORA48.1-201
ENST00000390879
135 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AL033519.2-201
ENST00000403958
392 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AP1B1P2-201
ENST00000416196
106 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC009161.1-201
ENST00000417306
376 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
HSPE1P21-201
ENST00000438283
308 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
DAP3P1-201
ENST00000441522
278 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
OR2AQ1P-201
ENST00000451972
200 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
PCMTD1P1-201
ENST00000455560
355 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AF186996.7-201
ENST00000492781
209 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
RPS23P5-201
ENST00000495419
428 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC063944.1-201
ENST00000496943
295 nt
TSL 3
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
RNVU1-2-201
ENST00000516326
135 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
RNU6-1314P-201
ENST00000517139
104 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC079907.1-201
ENST00000552707
374 nt
TSL 3
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC026470.2-201
ENST00000561492
181 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC022254.1-201
ENST00000567857
235 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC146944.4-201
ENST00000602697
718 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
5S_rRNA.11-201
ENST00000618635
84 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
ST7-OT4_2.1-201
ENST00000619089
172 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
AC137590.2-201
ENST00000619709
240 nt
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
GABRA2-209
ENST00000510861
3411 nt
APPRIS P1
TSL 5
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
SKIL-202
ENST00000413427
2702 nt
TSL 1 (best)
BASIC
1.66
□□□□□ -2.14
SDC3
O75056
RNU6-438P-201
ENST00000365561
103 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
FAM206A-202
ENST00000374624
499 nt
TSL 3
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
SNORD116-11-201
ENST00000383882
92 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
SNORD115-47-201
ENST00000391226
86 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
MIR548F1-201
ENST00000408667
84 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
RNU6-321P-201
ENST00000410912
106 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC009310.1-201
ENST00000414414
451 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AL590632.1-201
ENST00000424289
371 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
RNU7-14P-201
ENST00000459331
62 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC007215.1-201
ENST00000464893
276 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
CPHL1P-203
ENST00000471823
523 nt
TSL 5
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AL163540.1-201
ENST00000485382
386 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC145146.2-202
ENST00000508118
326 nt
TSL 3
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC011352.1-201
ENST00000512300
793 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
RNU6-864P-201
ENST00000516256
108 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AP005436.2-201
ENST00000528458
252 nt
TSL 5
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC024614.2-201
ENST00000577584
372 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
MIR3976-201
ENST00000606807
139 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC009033.1-201
ENST00000624279
431 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
AC006026.1-201
ENST00000444025
1803 nt
BASIC
1.65
□□□□□ -2.15
SDC3
O75056
SNORD50.1-201
ENST00000362987
71 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
Y_RNA.151-201
ENST00000363566
112 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
SNORA12.2-201
ENST00000391040
156 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
AL353572.1-201
ENST00000442490
417 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
SNRPEP8-201
ENST00000442866
260 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
AC079354.2-201
ENST00000453523
154 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
PPP1R2P5-201
ENST00000457256
603 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
MTCO2P30-201
ENST00000503662
364 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
AC108037.1-201
ENST00000514103
423 nt
TSL 3
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
DEFB131C-201
ENST00000528817
165 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
AC103810.8-201
ENST00000607347
118 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
MPP6-209
ENST00000625307
126 nt
TSL 5
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
MIR3662-201
ENST00000637030
95 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
AC073869.6-201
ENST00000640656
341 nt
BASIC
1.64
□□□□□ -2.15
SDC3
O75056
CYLC2-204
ENST00000612124
1817 nt
APPRIS P1
TSL 1 (best)
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
VPS13A-206
ENST00000376646
2262 nt
TSL 5
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
Y_RNA.226-201
ENST00000364337
114 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
SNORA18.2-201
ENST00000383865
132 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
RNU6-790P-201
ENST00000384479
105 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
TRAJ34-201
ENST00000390503
58 nt
APPRIS P1
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
SNORA67.5-201
ENST00000391036
107 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
MIR1277-201
ENST00000408536
78 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
RNU6-1148P-201
ENST00000410992
104 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
RPS20P15-201
ENST00000412792
311 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
NCOR1P3-201
ENST00000420479
303 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AL132875.2-201
ENST00000436418
325 nt
TSL 5
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
MTCO1P44-201
ENST00000441935
243 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AL138799.4-201
ENST00000443939
643 nt
TSL 3
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC007395.1-201
ENST00000451333
677 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC130509.1-201
ENST00000464158
433 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
RPL23AP75-201
ENST00000491601
451 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC005840.1-201
ENST00000498412
377 nt
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC007991.3-201
ENST00000517623
502 nt
TSL 4
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC091944.1-201
ENST00000521984
449 nt
TSL 3
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC090592.1-203
ENST00000533942
575 nt
TSL 3
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
AC009107.1-201
ENST00000561923
330 nt
TSL 3
BASIC
1.63
□□□□□ -2.15
SDC3
O75056
PTP4A1-204
ENST00000578299
135 nt
TSL 2
BASIC
1.63
□□□□□ -2.15
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Retrieved 100 of 98,524 protein–RNA pairs in 175 ms