Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.25□□□□□ -2.05
CREB3O43889 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
CREB3O43889 MIR8074-201ENST00000615081 81 ntBASIC2.25□□□□□ -2.05
CREB3O43889 uc_338.20-201ENST00000621563 178 ntBASIC2.25□□□□□ -2.05
CREB3O43889 AL078596.1-201ENST00000624856 447 ntBASIC2.25□□□□□ -2.05
CREB3O43889 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
CREB3O43889 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CREB3O43889 RNU6-862P-201ENST00000362804 105 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RNU6-414P-201ENST00000363705 104 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
CREB3O43889 Y_RNA.319-201ENST00000365138 92 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RNU6-541P-201ENST00000384709 110 ntBASIC2.24□□□□□ -2.05
CREB3O43889 CST2P1-201ENST00000425770 87 ntBASIC2.24□□□□□ -2.05
CREB3O43889 FTH1P12-201ENST00000432137 551 ntBASIC2.24□□□□□ -2.05
CREB3O43889 MTATP6P13-201ENST00000438531 667 ntBASIC2.24□□□□□ -2.05
CREB3O43889 snoU13.15-201ENST00000459407 104 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RPS29P25-201ENST00000481709 171 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RPL36AP21-201ENST00000490372 323 ntBASIC2.24□□□□□ -2.05
CREB3O43889 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.24□□□□□ -2.05
CREB3O43889 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CREB3O43889 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.24□□□□□ -2.05
CREB3O43889 RNU6-237P-201ENST00000515985 71 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RNU6-1041P-201ENST00000516254 102 ntBASIC2.24□□□□□ -2.05
CREB3O43889 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
CREB3O43889 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
CREB3O43889 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CREB3O43889 HSBP1P1-201ENST00000555205 166 ntBASIC2.24□□□□□ -2.05
CREB3O43889 MIR4273-201ENST00000582824 84 ntBASIC2.24□□□□□ -2.05
CREB3O43889 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.24□□□□□ -2.05
CREB3O43889 SNORD11B-201ENST00000607707 90 ntBASIC2.24□□□□□ -2.05
CREB3O43889 AC008873.1-201ENST00000625051 138 ntBASIC2.24□□□□□ -2.05
CREB3O43889 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CREB3O43889 SNORA72.2-201ENST00000365028 127 ntBASIC2.23□□□□□ -2.05
CREB3O43889 RNU6-596P-201ENST00000365395 98 ntBASIC2.23□□□□□ -2.05
CREB3O43889 MIR515-2-201ENST00000384883 83 ntBASIC2.23□□□□□ -2.05
CREB3O43889 MIR515-1-201ENST00000384884 83 ntBASIC2.23□□□□□ -2.05
CREB3O43889 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.23□□□□□ -2.05
CREB3O43889 AL356320.1-201ENST00000429616 163 ntBASIC2.23□□□□□ -2.05
CREB3O43889 C8orf59P1-201ENST00000429930 303 ntBASIC2.23□□□□□ -2.05
CREB3O43889 MTCO3P29-201ENST00000432119 779 ntBASIC2.23□□□□□ -2.05
CREB3O43889 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
CREB3O43889 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
CREB3O43889 IGKV3-31-201ENST00000523109 329 ntBASIC2.23□□□□□ -2.05
CREB3O43889 SNRPGP18-201ENST00000553000 214 ntBASIC2.23□□□□□ -2.05
CREB3O43889 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
CREB3O43889 MIR4524B-201ENST00000581569 115 ntBASIC2.23□□□□□ -2.05
CREB3O43889 AL158827.2-201ENST00000602494 330 ntBASIC2.23□□□□□ -2.05
CREB3O43889 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.23□□□□□ -2.05
CREB3O43889 AL691447.3-201ENST00000635020 330 ntBASIC2.23□□□□□ -2.05
CREB3O43889 AC010615.1-201ENST00000594254 1764 ntBASIC2.23□□□□□ -2.05
CREB3O43889 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.23□□□□□ -2.05
CREB3O43889 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
CREB3O43889 RNU6-831P-201ENST00000384548 107 ntBASIC2.22□□□□□ -2.05
CREB3O43889 MIR549A-201ENST00000385268 96 ntBASIC2.22□□□□□ -2.05
CREB3O43889 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CREB3O43889 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
CREB3O43889 HMGN2P23-201ENST00000456759 269 ntBASIC2.22□□□□□ -2.05
CREB3O43889 AC092989.1-201ENST00000481235 277 ntBASIC2.22□□□□□ -2.05
CREB3O43889 RNA5SP481-201ENST00000516814 122 ntBASIC2.22□□□□□ -2.05
CREB3O43889 RNA5SP454-201ENST00000517231 127 ntBASIC2.22□□□□□ -2.05
CREB3O43889 AC026464.5-201ENST00000562497 722 ntBASIC2.22□□□□□ -2.05
CREB3O43889 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.22□□□□□ -2.05
CREB3O43889 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.22□□□□□ -2.05
CREB3O43889 AC139792.2-201ENST00000624218 587 ntBASIC2.22□□□□□ -2.05
CREB3O43889 AC073869.6-201ENST00000640656 341 ntBASIC2.22□□□□□ -2.05
CREB3O43889 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
CREB3O43889 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CREB3O43889 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CREB3O43889 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CREB3O43889 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CREB3O43889 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CREB3O43889 RNU6-280P-201ENST00000364145 104 ntBASIC2.21□□□□□ -2.06
CREB3O43889 Y_RNA.490-201ENST00000384413 102 ntBASIC2.21□□□□□ -2.06
CREB3O43889 SNORA48.3-201ENST00000391081 134 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AC004866.1-201ENST00000411748 78 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.21□□□□□ -2.06
CREB3O43889 AC060773.1-201ENST00000421698 310 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.21□□□□□ -2.06
CREB3O43889 RPL31P63-201ENST00000422565 375 ntBASIC2.21□□□□□ -2.06
CREB3O43889 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.21□□□□□ -2.06
CREB3O43889 AC099677.2-201ENST00000436385 175 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.21□□□□□ -2.06
CREB3O43889 RNU6-566P-201ENST00000516790 107 ntBASIC2.21□□□□□ -2.06
CREB3O43889 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.21□□□□□ -2.06
CREB3O43889 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.21□□□□□ -2.06
CREB3O43889 AC010928.2-201ENST00000588017 287 ntBASIC2.21□□□□□ -2.06
CREB3O43889 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.21□□□□□ -2.06
CREB3O43889 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
CREB3O43889 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CREB3O43889 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
CREB3O43889 RNU1-62P-201ENST00000362599 164 ntBASIC2.2□□□□□ -2.06
CREB3O43889 RNU6-296P-201ENST00000384608 107 ntBASIC2.2□□□□□ -2.06
CREB3O43889 RNU6-306P-201ENST00000384617 107 ntBASIC2.2□□□□□ -2.06
CREB3O43889 RNU6-510P-201ENST00000391239 108 ntBASIC2.2□□□□□ -2.06
CREB3O43889 MIR548F1-201ENST00000408667 84 ntBASIC2.2□□□□□ -2.06
CREB3O43889 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
CREB3O43889 AC008134.1-201ENST00000420943 193 ntBASIC2.2□□□□□ -2.06
CREB3O43889 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.2□□□□□ -2.06
CREB3O43889 HSPE1P21-201ENST00000438283 308 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms