Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.87□□□□□ -1.95
PRPF3O43395 MTCYBP6-201ENST00000441810 138 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 AC074290.1-201ENST00000448883 135 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.87□□□□□ -1.95
PRPF3O43395 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.87□□□□□ -1.95
PRPF3O43395 CYCSP26-201ENST00000534107 320 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.87□□□□□ -1.95
PRPF3O43395 MIR3171-201ENST00000584270 74 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 AC016727.2-201ENST00000603988 621 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 AC013412.1-201ENST00000610687 192 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF3O43395 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PRPF3O43395 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRPF3O43395 RNU6-874P-201ENST00000362390 105 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 XGY1-201ENST00000381172 446 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 RNU6-1026P-201ENST00000384465 108 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 MIR487A-201ENST00000385009 80 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PRPF3O43395 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF3O43395 PMCHL1-202ENST00000423102 261 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 RNU7-87P-201ENST00000459343 62 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.86□□□□□ -1.95
PRPF3O43395 RNU2-44P-201ENST00000516795 194 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 AC091925.1-201ENST00000623204 462 ntBASIC2.86□□□□□ -1.95
PRPF3O43395 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.86□□□□□ -1.95
PRPF3O43395 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PRPF3O43395 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PRPF3O43395 ZNF204P-201ENST00000416749 2397 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 MIR449A-201ENST00000362113 91 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 Y_RNA.106-201ENST00000363189 100 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 Y_RNA.132-201ENST00000363421 102 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 SNORA12-201ENST00000391162 147 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 AC027124.2-201ENST00000428249 105 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 RPS12P2-201ENST00000439728 269 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 AC114982.1-201ENST00000469402 321 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 AC018868.1-201ENST00000491307 315 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 Y_RNA.711-201ENST00000516993 102 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 RNU6-667P-201ENST00000517186 102 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 RN7SKP295-201ENST00000517264 153 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.85□□□□□ -1.95
PRPF3O43395 MIR3126-201ENST00000577443 74 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF3O43395 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.85□□□□□ -1.95
PRPF3O43395 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.85□□□□□ -1.95
PRPF3O43395 AC092447.9-201ENST00000603395 144 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.85□□□□□ -1.95
PRPF3O43395 AC006157.1-201ENST00000611750 366 ntBASIC2.85□□□□□ -1.95
PRPF3O43395 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
PRPF3O43395 SNORD31B-201ENST00000364977 69 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 RNY1P14-201ENST00000384426 108 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PRPF3O43395 AL359511.1-201ENST00000402970 211 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 Y_RNA.605-201ENST00000410577 105 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC009963.1-201ENST00000417265 157 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC114482.1-201ENST00000418010 247 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF3O43395 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC004386.2-201ENST00000441858 148 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC096638.1-201ENST00000444678 216 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AP000870.1-201ENST00000472927 406 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF3O43395 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF3O43395 RNA5SP137-201ENST00000516833 135 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 MIR5006-201ENST00000583027 110 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC087588.2-201ENST00000617667 426 ntBASIC2.84□□□□□ -1.95
PRPF3O43395 AC016717.2-201ENST00000609089 5141 ntBASIC2.84□□□□□ -1.96
PRPF3O43395 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF3O43395 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PRPF3O43395 MTND5P16-201ENST00000460269 1703 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 Y_RNA.28-201ENST00000362554 111 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 Y_RNA.99-201ENST00000363138 105 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 RNY3P11-201ENST00000364153 102 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 Y_RNA.358-201ENST00000365491 99 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 MIR29C-201ENST00000385231 88 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 RNU2-48P-201ENST00000410694 191 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 MTCO3P19-201ENST00000415864 321 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 MCFD2P1-201ENST00000417812 300 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 CR769767.1-201ENST00000436337 346 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 MTND4P19-201ENST00000446659 478 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 RNU7-169P-201ENST00000459456 61 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 AL163540.1-201ENST00000485382 386 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF3O43395 RNU6-475P-201ENST00000516073 104 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 SNORA25.14-201ENST00000516481 132 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 RNU6-988P-201ENST00000519081 107 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.83□□□□□ -1.96
PRPF3O43395 AL442663.2-201ENST00000554385 511 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 SNORD11B-201ENST00000607707 90 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 AC083806.3-201ENST00000614016 455 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 AC007485.1-201ENST00000616755 206 ntBASIC2.83□□□□□ -1.96
PRPF3O43395 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PRPF3O43395 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF3O43395 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF3O43395 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PRPF3O43395 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF3O43395 RNU6-222P-201ENST00000362438 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms