Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
PAX4O43316 RNA5SP397-201ENST00000391323 118 ntBASIC3.19□□□□□ -1.9
PAX4O43316 RNA5SP146-201ENST00000410743 123 ntBASIC3.19□□□□□ -1.9
PAX4O43316 RNU6-733P-201ENST00000410759 104 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AC069285.2-201ENST00000440210 275 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AC073264.2-201ENST00000448886 166 ntBASIC3.19□□□□□ -1.9
PAX4O43316 IGLV2-34-201ENST00000490007 283 ntBASIC3.19□□□□□ -1.9
PAX4O43316 RPS23P1-201ENST00000491662 432 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.19□□□□□ -1.9
PAX4O43316 MRPS17P9-201ENST00000511924 393 ntBASIC3.19□□□□□ -1.9
PAX4O43316 Y_RNA.705-201ENST00000516862 110 ntBASIC3.19□□□□□ -1.9
PAX4O43316 MTND6P33-201ENST00000571794 183 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AL034555.1-201ENST00000604816 211 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AC005086.4-201ENST00000623065 213 ntBASIC3.19□□□□□ -1.9
PAX4O43316 AC095038.3-201ENST00000634439 195 ntBASIC3.19□□□□□ -1.9
PAX4O43316 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
PAX4O43316 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.19□□□□□ -1.9
PAX4O43316 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PAX4O43316 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PAX4O43316 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.19□□□□□ -1.9
PAX4O43316 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PAX4O43316 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.18□□□□□ -1.9
PAX4O43316 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.18□□□□□ -1.9
PAX4O43316 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX4O43316 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 AC021146.4-201ENST00000309229 279 ntBASIC3.18□□□□□ -1.9
PAX4O43316 RNU6-888P-201ENST00000363010 101 ntBASIC3.18□□□□□ -1.9
PAX4O43316 RNU1-20P-201ENST00000363314 162 ntBASIC3.18□□□□□ -1.9
PAX4O43316 SNORD113.2-201ENST00000364166 89 ntBASIC3.18□□□□□ -1.9
PAX4O43316 RNU6-1305P-201ENST00000364353 104 ntBASIC3.18□□□□□ -1.9
PAX4O43316 RNU6-117P-201ENST00000365415 107 ntBASIC3.18□□□□□ -1.9
PAX4O43316 SNORD14D-201ENST00000384390 87 ntBASIC3.18□□□□□ -1.9
PAX4O43316 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
PAX4O43316 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 SNORD65B-201ENST00000459126 73 ntBASIC3.18□□□□□ -1.9
PAX4O43316 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX4O43316 RPS27AP10-201ENST00000496103 208 ntBASIC3.18□□□□□ -1.9
PAX4O43316 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
PAX4O43316 MIR5197-201ENST00000583721 112 ntBASIC3.18□□□□□ -1.9
PAX4O43316 MIR6780A-201ENST00000615089 68 ntBASIC3.18□□□□□ -1.9
PAX4O43316 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX4O43316 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PAX4O43316 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PAX4O43316 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PAX4O43316 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 RNU6-363P-201ENST00000362895 105 ntBASIC3.17□□□□□ -1.9
PAX4O43316 MIR1250-201ENST00000408098 113 ntBASIC3.17□□□□□ -1.9
PAX4O43316 RN7SKP177-201ENST00000410567 355 ntBASIC3.17□□□□□ -1.9
PAX4O43316 RNU2-40P-201ENST00000410833 196 ntBASIC3.17□□□□□ -1.9
PAX4O43316 CKS1BP5-201ENST00000434172 273 ntBASIC3.17□□□□□ -1.9
PAX4O43316 RPS4XP11-201ENST00000446897 772 ntBASIC3.17□□□□□ -1.9
PAX4O43316 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
PAX4O43316 RNA5SP20-201ENST00000515976 84 ntBASIC3.17□□□□□ -1.9
PAX4O43316 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX4O43316 AL161713.1-201ENST00000555538 145 ntBASIC3.17□□□□□ -1.9
PAX4O43316 AC105129.1-201ENST00000560250 297 ntBASIC3.17□□□□□ -1.9
PAX4O43316 MIR4458-201ENST00000578872 75 ntBASIC3.17□□□□□ -1.9
PAX4O43316 MIR3134-201ENST00000579433 74 ntBASIC3.17□□□□□ -1.9
PAX4O43316 RN7SL690P-201ENST00000582087 240 ntBASIC3.17□□□□□ -1.9
PAX4O43316 U6.73-201ENST00000619194 103 ntBASIC3.17□□□□□ -1.9
PAX4O43316 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
PAX4O43316 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PAX4O43316 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX4O43316 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PAX4O43316 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX4O43316 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX4O43316 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX4O43316 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX4O43316 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX4O43316 RNU1-96P-201ENST00000364163 162 ntBASIC3.16□□□□□ -1.9
PAX4O43316 RNU1-63P-201ENST00000383902 164 ntBASIC3.16□□□□□ -1.9
PAX4O43316 RNU1-73P-201ENST00000383971 164 ntBASIC3.16□□□□□ -1.9
PAX4O43316 SNORA70F-201ENST00000384142 135 ntBASIC3.16□□□□□ -1.9
PAX4O43316 SNORA18-201ENST00000384416 132 ntBASIC3.16□□□□□ -1.9
PAX4O43316 Y_RNA.507-201ENST00000384500 99 ntBASIC3.16□□□□□ -1.9
PAX4O43316 MIR518F-201ENST00000384973 87 ntBASIC3.16□□□□□ -1.9
PAX4O43316 U8.15-201ENST00000390947 134 ntBASIC3.16□□□□□ -1.9
PAX4O43316 Y_RNA.609-201ENST00000410669 89 ntBASIC3.16□□□□□ -1.9
PAX4O43316 RPL37P18-201ENST00000411602 243 ntBASIC3.16□□□□□ -1.9
PAX4O43316 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.16□□□□□ -1.9
PAX4O43316 AL590139.1-201ENST00000416267 400 ntBASIC3.16□□□□□ -1.9
PAX4O43316 AC011998.1-201ENST00000433403 117 ntBASIC3.16□□□□□ -1.9
PAX4O43316 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
PAX4O43316 RN7SL817P-201ENST00000480777 288 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms