Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 AC104581.2-201ENST00000572227 430 ntBASIC2.34□□□□□ -2.03
HOXC11O43248 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC11O43248 MIR4753-201ENST00000585119 83 ntBASIC2.34□□□□□ -2.03
HOXC11O43248 AC016727.1-205ENST00000605437 569 ntBASIC2.34□□□□□ -2.03
HOXC11O43248 AC100812.1-201ENST00000607622 580 ntBASIC2.34□□□□□ -2.03
HOXC11O43248 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
HOXC11O43248 LINC02555-201ENST00000563933 1951 ntBASIC2.34□□□□□ -2.04
HOXC11O43248 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HOXC11O43248 KPNA2P1-201ENST00000458289 1591 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RNU6-23P-201ENST00000363283 107 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RNU6-137P-201ENST00000363680 108 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 Y_RNA.405-201ENST00000383979 100 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 Y_RNA.451-201ENST00000384200 100 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RNU6-17P-201ENST00000384245 107 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RNU6-18P-201ENST00000384527 107 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 Y_RNA.524-201ENST00000384564 100 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 Y_RNA.561-201ENST00000384694 100 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 SNORA12.2-201ENST00000391040 156 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 AC007395.1-201ENST00000451333 677 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 RNU6-58P-201ENST00000517143 103 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC11O43248 AC105029.1-201ENST00000520250 669 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC11O43248 MIR5690-201ENST00000583739 73 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 CYP2C61P-201ENST00000604072 290 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 AC113139.1-201ENST00000605049 239 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
HOXC11O43248 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC11O43248 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC11O43248 RNU6-545P-201ENST00000362681 104 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 RNU6-1164P-201ENST00000364428 107 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 RNU6-245P-201ENST00000384020 107 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 MIR487A-201ENST00000385009 80 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HOXC11O43248 RNU6-370P-201ENST00000411008 104 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC11O43248 AC093019.1-201ENST00000443135 252 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 AC074290.1-201ENST00000448883 135 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 AC016925.1-201ENST00000458303 298 ntBASIC2.32□□□□□ -2.04
HOXC11O43248 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC11O43248 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC11O43248 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC11O43248 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC11O43248 RNY1P16-201ENST00000363063 111 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 RNU6-280P-201ENST00000364145 104 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 MIR1283-1-201ENST00000408494 87 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 AC139712.2-201ENST00000424302 339 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC11O43248 MTND5P20-201ENST00000448677 143 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC11O43248 AC114982.1-201ENST00000469402 321 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.31□□□□□ -2.04
HOXC11O43248 AC093303.1-201ENST00000514549 295 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 SNORA25.14-201ENST00000516481 132 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 RRN3P3-201ENST00000549207 578 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 AC025253.1-201ENST00000613623 543 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 SDR42E1P4-201ENST00000620894 481 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 AC092794.2-201ENST00000620933 563 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 AL669831.3-213ENST00000636676 183 ntBASIC2.31□□□□□ -2.04
HOXC11O43248 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC11O43248 Y_RNA.303-201ENST00000364998 94 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 Y_RNA.384-201ENST00000383909 102 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 Y_RNA.404-201ENST00000383978 102 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 RNU6-331P-201ENST00000384724 107 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 U3.40-201ENST00000408706 208 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 MTCO3P29-201ENST00000432119 779 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AL353997.1-201ENST00000432936 108 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC11O43248 RNU6-559P-201ENST00000516151 98 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 RNA5SP384-201ENST00000516615 116 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 AC027288.2-201ENST00000553028 243 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 MIR4287-201ENST00000579398 78 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.3□□□□□ -2.04
HOXC11O43248 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
HOXC11O43248 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HOXC11O43248 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 RNA5SP493-201ENST00000364115 91 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 MIR504-201ENST00000385065 83 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 RNU6-1009P-201ENST00000390996 107 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 RNU4-14P-201ENST00000410858 122 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC11O43248 MTCYBP10-201ENST00000424905 650 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
HOXC11O43248 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms