Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC091912.1-201ENST00000511351 248 ntBASIC6.9□□□□□ -1.3
MSH5O43196 RNU6-928P-201ENST00000516876 104 ntBASIC6.9□□□□□ -1.3
MSH5O43196 RNU7-35P-201ENST00000517174 62 ntBASIC6.9□□□□□ -1.3
MSH5O43196 DLEU2_4.2-201ENST00000616613 58 ntBASIC6.9□□□□□ -1.3
MSH5O43196 AC087385.3-201ENST00000620477 187 ntBASIC6.9□□□□□ -1.3
MSH5O43196 MIR6717-201ENST00000622747 73 ntBASIC6.9□□□□□ -1.3
MSH5O43196 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
MSH5O43196 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.31
MSH5O43196 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
MSH5O43196 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
MSH5O43196 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MSH5O43196 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
MSH5O43196 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MSH5O43196 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.89□□□□□ -1.31
MSH5O43196 RNU6-753P-201ENST00000363926 107 ntBASIC6.89□□□□□ -1.31
MSH5O43196 RNA5SP261-201ENST00000410536 106 ntBASIC6.89□□□□□ -1.31
MSH5O43196 AP002004.2-201ENST00000531656 154 ntBASIC6.89□□□□□ -1.31
MSH5O43196 AC122688.1-201ENST00000541494 223 ntBASIC6.89□□□□□ -1.31
MSH5O43196 MIR4270-201ENST00000581799 70 ntBASIC6.89□□□□□ -1.31
MSH5O43196 U2.20-201ENST00000613956 192 ntBASIC6.89□□□□□ -1.31
MSH5O43196 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
MSH5O43196 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MSH5O43196 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MSH5O43196 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MSH5O43196 AC068254.2-201ENST00000623938 3577 ntBASIC6.88□□□□□ -1.31
MSH5O43196 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.88□□□□□ -1.31
MSH5O43196 RNVU1-6-201ENST00000364688 164 ntBASIC6.88□□□□□ -1.31
MSH5O43196 RNA5SP455-201ENST00000365190 119 ntBASIC6.88□□□□□ -1.31
MSH5O43196 MIR600-201ENST00000385007 98 ntBASIC6.88□□□□□ -1.31
MSH5O43196 RN7SKP202-201ENST00000410439 330 ntBASIC6.88□□□□□ -1.31
MSH5O43196 AC244098.2-201ENST00000422068 99 ntBASIC6.88□□□□□ -1.31
MSH5O43196 HSPE1P24-201ENST00000450782 238 ntBASIC6.88□□□□□ -1.31
MSH5O43196 snoU13.17-201ENST00000458802 104 ntBASIC6.88□□□□□ -1.31
MSH5O43196 RN7SL41P-201ENST00000476144 297 ntBASIC6.88□□□□□ -1.31
MSH5O43196 IGLV3-17-201ENST00000519099 244 ntBASIC6.88□□□□□ -1.31
MSH5O43196 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.88□□□□□ -1.31
MSH5O43196 AC090517.3-201ENST00000625170 141 ntBASIC6.88□□□□□ -1.31
MSH5O43196 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MSH5O43196 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MSH5O43196 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.88□□□□□ -1.31
MSH5O43196 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
MSH5O43196 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.87□□□□□ -1.31
MSH5O43196 RNU4-83P-201ENST00000410863 133 ntBASIC6.87□□□□□ -1.31
MSH5O43196 AL450023.3-201ENST00000440592 271 ntBASIC6.87□□□□□ -1.31
MSH5O43196 AC093249.4-201ENST00000564755 259 ntBASIC6.87□□□□□ -1.31
MSH5O43196 HMGN2P15-201ENST00000585707 270 ntBASIC6.87□□□□□ -1.31
MSH5O43196 AP001362.1-201ENST00000625165 124 ntBASIC6.87□□□□□ -1.31
MSH5O43196 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.87□□□□□ -1.31
MSH5O43196 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MSH5O43196 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
MSH5O43196 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MSH5O43196 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MSH5O43196 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.86□□□□□ -1.31
MSH5O43196 AC021146.4-201ENST00000309229 279 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNA5SP192-201ENST00000364404 120 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RPS16P5-201ENST00000406501 404 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-447P-201ENST00000410293 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-1118P-201ENST00000410382 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-1076P-201ENST00000410397 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-355P-201ENST00000410427 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-791P-201ENST00000410467 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-705P-201ENST00000410601 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-1100P-201ENST00000410691 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-860P-201ENST00000410860 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-1217P-201ENST00000411276 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RNU6-785P-201ENST00000411324 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 PPIAP15-201ENST00000479662 484 ntBASIC6.86□□□□□ -1.31
MSH5O43196 RN7SL504P-201ENST00000494496 287 ntBASIC6.86□□□□□ -1.31
MSH5O43196 AC006023.1-201ENST00000603944 259 ntBASIC6.86□□□□□ -1.31
MSH5O43196 U6.90-201ENST00000614007 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 U6.70-201ENST00000620287 104 ntBASIC6.86□□□□□ -1.31
MSH5O43196 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.86□□□□□ -1.31
MSH5O43196 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.86□□□□□ -1.31
MSH5O43196 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.86□□□□□ -1.31
MSH5O43196 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MSH5O43196 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
MSH5O43196 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC6.85□□□□□ -1.31
MSH5O43196 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
MSH5O43196 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.85□□□□□ -1.31
MSH5O43196 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MSH5O43196 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.85□□□□□ -1.31
MSH5O43196 RNU6-340P-201ENST00000364005 107 ntBASIC6.85□□□□□ -1.31
MSH5O43196 RNA5SP505-201ENST00000364748 108 ntBASIC6.85□□□□□ -1.31
MSH5O43196 PPIAP31-201ENST00000405422 495 ntBASIC6.85□□□□□ -1.31
MSH5O43196 AC018868.1-201ENST00000491307 315 ntBASIC6.85□□□□□ -1.31
MSH5O43196 SNORD19.2-201ENST00000516978 73 ntBASIC6.85□□□□□ -1.31
MSH5O43196 RNU7-181P-201ENST00000517234 74 ntBASIC6.85□□□□□ -1.31
MSH5O43196 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MSH5O43196 GVINP1-202ENST00000531871 7271 ntBASIC6.85□□□□□ -1.31
MSH5O43196 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH5O43196 FAM35BP-202ENST00000497389 3337 ntBASIC6.84□□□□□ -1.31
MSH5O43196 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
MSH5O43196 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH5O43196 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
MSH5O43196 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC6.84□□□□□ -1.31
MSH5O43196 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH5O43196 RNU6-940P-201ENST00000363433 104 ntBASIC6.84□□□□□ -1.31
MSH5O43196 RNA5SP87-201ENST00000384155 118 ntBASIC6.84□□□□□ -1.31
MSH5O43196 MIR2113-201ENST00000459007 91 ntBASIC6.84□□□□□ -1.31
MSH5O43196 AC091153.1-201ENST00000466297 402 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms