Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.58□□□□□ -2
PCDH17O14917 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PCDH17O14917 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PCDH17O14917 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDH17O14917 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
PCDH17O14917 Y_RNA.80-201ENST00000362996 102 ntBASIC2.57□□□□□ -2
PCDH17O14917 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
PCDH17O14917 RNU6-308P-201ENST00000390957 107 ntBASIC2.57□□□□□ -2
PCDH17O14917 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PCDH17O14917 AL357139.1-201ENST00000407792 426 ntBASIC2.57□□□□□ -2
PCDH17O14917 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.57□□□□□ -2
PCDH17O14917 AC009237.7-201ENST00000447357 229 ntBASIC2.57□□□□□ -2
PCDH17O14917 RNU7-169P-201ENST00000459456 61 ntBASIC2.57□□□□□ -2
PCDH17O14917 AL163540.1-201ENST00000485382 386 ntBASIC2.57□□□□□ -2
PCDH17O14917 RPS23P5-201ENST00000495419 428 ntBASIC2.57□□□□□ -2
PCDH17O14917 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.57□□□□□ -2
PCDH17O14917 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.57□□□□□ -2
PCDH17O14917 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.57□□□□□ -2
PCDH17O14917 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
PCDH17O14917 UBL5P4-201ENST00000562584 236 ntBASIC2.57□□□□□ -2
PCDH17O14917 MIR5006-201ENST00000583027 110 ntBASIC2.57□□□□□ -2
PCDH17O14917 AC005296.1-201ENST00000616145 209 ntBASIC2.57□□□□□ -2
PCDH17O14917 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDH17O14917 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PCDH17O14917 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PCDH17O14917 RNU1-62P-201ENST00000362599 164 ntBASIC2.56□□□□□ -2
PCDH17O14917 Y_RNA.557-201ENST00000384680 107 ntBASIC2.56□□□□□ -2
PCDH17O14917 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.56□□□□□ -2
PCDH17O14917 EIF1P2-201ENST00000428233 350 ntBASIC2.56□□□□□ -2
PCDH17O14917 WARS2P1-201ENST00000429678 537 ntBASIC2.56□□□□□ -2
PCDH17O14917 AC004386.2-201ENST00000441858 148 ntBASIC2.56□□□□□ -2
PCDH17O14917 AC107032.1-201ENST00000485945 480 ntBASIC2.56□□□□□ -2
PCDH17O14917 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.56□□□□□ -2
PCDH17O14917 SNORA40.14-201ENST00000516543 86 ntBASIC2.56□□□□□ -2
PCDH17O14917 RNU4-77P-201ENST00000516692 156 ntBASIC2.56□□□□□ -2
PCDH17O14917 AC022868.1-201ENST00000517767 391 ntBASIC2.56□□□□□ -2
PCDH17O14917 AC093023.1-201ENST00000547375 507 ntBASIC2.56□□□□□ -2
PCDH17O14917 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.56□□□□□ -2
PCDH17O14917 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
PCDH17O14917 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PCDH17O14917 Y_RNA.31-201ENST00000362574 102 ntBASIC2.55□□□□□ -2
PCDH17O14917 Y_RNA.148-201ENST00000363557 117 ntBASIC2.55□□□□□ -2
PCDH17O14917 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-879P-201ENST00000364328 108 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-793P-201ENST00000384233 104 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-611P-201ENST00000384276 104 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-1026P-201ENST00000384465 108 ntBASIC2.55□□□□□ -2
PCDH17O14917 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDH17O14917 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PCDH17O14917 RNU2-52P-201ENST00000410680 190 ntBASIC2.55□□□□□ -2
PCDH17O14917 AL160004.2-201ENST00000432935 350 ntBASIC2.55□□□□□ -2
PCDH17O14917 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
PCDH17O14917 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
PCDH17O14917 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.55□□□□□ -2
PCDH17O14917 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-344P-201ENST00000516635 111 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU6-965P-201ENST00000516721 96 ntBASIC2.55□□□□□ -2
PCDH17O14917 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
PCDH17O14917 CYCSP23-201ENST00000519781 313 ntBASIC2.55□□□□□ -2
PCDH17O14917 HSBP1P1-201ENST00000555205 166 ntBASIC2.55□□□□□ -2
PCDH17O14917 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
PCDH17O14917 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
PCDH17O14917 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
PCDH17O14917 SNORD11B-201ENST00000607707 90 ntBASIC2.55□□□□□ -2
PCDH17O14917 AC010999.1-201ENST00000611856 324 ntBASIC2.55□□□□□ -2
PCDH17O14917 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
PCDH17O14917 AC007485.1-201ENST00000616755 206 ntBASIC2.55□□□□□ -2
PCDH17O14917 AC138305.3-201ENST00000624988 240 ntBASIC2.55□□□□□ -2
PCDH17O14917 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCDH17O14917 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCDH17O14917 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PCDH17O14917 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PCDH17O14917 AC005592.1-201ENST00000566527 1640 ntBASIC2.54□□□□□ -2
PCDH17O14917 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCDH17O14917 SNORA25B-201ENST00000365507 128 ntBASIC2.54□□□□□ -2
PCDH17O14917 RNY3P4-201ENST00000384428 101 ntBASIC2.54□□□□□ -2
PCDH17O14917 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.54□□□□□ -2
PCDH17O14917 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.54□□□□□ -2
PCDH17O14917 MTCO3P8-201ENST00000453691 755 ntBASIC2.54□□□□□ -2
PCDH17O14917 RNU2-44P-201ENST00000516795 194 ntBASIC2.54□□□□□ -2
PCDH17O14917 DEFB131C-201ENST00000528817 165 ntBASIC2.54□□□□□ -2
PCDH17O14917 AL442163.3-201ENST00000554110 156 ntBASIC2.54□□□□□ -2
PCDH17O14917 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.54□□□□□ -2
PCDH17O14917 AC104984.5-201ENST00000586878 94 ntBASIC2.54□□□□□ -2
PCDH17O14917 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.54□□□□□ -2
PCDH17O14917 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDH17O14917 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDH17O14917 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
PCDH17O14917 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PCDH17O14917 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
PCDH17O14917 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDH17O14917 Y_RNA.27-201ENST00000362540 103 ntBASIC2.53□□□□□ -2
PCDH17O14917 Y_RNA.179-201ENST00000363844 90 ntBASIC2.53□□□□□ -2
PCDH17O14917 RNY3P11-201ENST00000364153 102 ntBASIC2.53□□□□□ -2
PCDH17O14917 SNORA22B-201ENST00000383876 138 ntBASIC2.53□□□□□ -2
PCDH17O14917 Y_RNA.422-201ENST00000384054 114 ntBASIC2.53□□□□□ -2
PCDH17O14917 RNU6-281P-201ENST00000384212 103 ntBASIC2.53□□□□□ -2
PCDH17O14917 RNA5SP213-201ENST00000391031 106 ntBASIC2.53□□□□□ -2
PCDH17O14917 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
PCDH17O14917 RNA5SP508-201ENST00000411327 119 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms