Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01548A6NM66 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
LINC01548A6NM66 AC000403.1-201ENST00000613696 3585 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
LINC01548A6NM66 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.56□□□□□ -2
LINC01548A6NM66 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 Y_RNA.170-201ENST00000363746 110 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 RNU6-324P-201ENST00000363957 106 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 Y_RNA.304-201ENST00000365011 112 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 MIR767-201ENST00000390228 109 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 RNU6-1077P-201ENST00000410506 102 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 RPS3P1-201ENST00000456781 192 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 RPL23AP62-201ENST00000463396 453 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 AC021205.2-201ENST00000480069 347 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.56□□□□□ -2
LINC01548A6NM66 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.56□□□□□ -2
LINC01548A6NM66 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.56□□□□□ -2
LINC01548A6NM66 SNORA31.1-201ENST00000515993 133 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 SNORA31.5-201ENST00000516190 133 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.56□□□□□ -2
LINC01548A6NM66 AC027176.1-201ENST00000560204 514 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
LINC01548A6NM66 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 TCL6_2.1-201ENST00000615162 119 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 AL365265.1-201ENST00000621045 234 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 MIR3651-201ENST00000630427 90 ntBASIC2.56□□□□□ -2
LINC01548A6NM66 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01548A6NM66 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.55□□□□□ -2
LINC01548A6NM66 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01548A6NM66 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01548A6NM66 RNU1-75P-201ENST00000347264 129 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 RNU6-653P-201ENST00000363074 106 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 Y_RNA.240-201ENST00000364469 95 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 Y_RNA.262-201ENST00000364641 102 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 RNU6-804P-201ENST00000384286 107 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.55□□□□□ -2
LINC01548A6NM66 RNA5SP229-201ENST00000410809 99 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 AL365496.1-201ENST00000426885 215 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 RPL36AP48-201ENST00000485521 314 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 RNU6-344P-201ENST00000516635 111 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 AP005660.1-201ENST00000522972 293 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 MIR2682-201ENST00000580305 110 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
LINC01548A6NM66 AC006380.1-201ENST00000603598 186 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 AL161756.2-201ENST00000604597 246 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 YPEL5P2-201ENST00000605553 359 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 AC104465.1-201ENST00000611365 139 ntBASIC2.55□□□□□ -2
LINC01548A6NM66 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01548A6NM66 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01548A6NM66 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
LINC01548A6NM66 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 Y_RNA.8-201ENST00000362353 102 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AL357139.1-201ENST00000407792 426 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 U3.40-201ENST00000408706 208 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 CST9LP2-201ENST00000437612 320 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
LINC01548A6NM66 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 RPS27P29-201ENST00000463110 252 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AC091021.1-201ENST00000468051 388 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 RN7SL807P-201ENST00000470923 297 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
LINC01548A6NM66 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 RNU6-436P-201ENST00000516171 114 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 MTND5P41-201ENST00000517498 206 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
LINC01548A6NM66 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.54□□□□□ -2
LINC01548A6NM66 AC079598.5-201ENST00000547460 117 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.54□□□□□ -2
LINC01548A6NM66 U6.106-201ENST00000636360 105 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 U6.98-201ENST00000637157 84 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 MIR7153-201ENST00000637758 57 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 AC073346.2-201ENST00000624724 2058 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01548A6NM66 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
LINC01548A6NM66 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01548A6NM66 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
LINC01548A6NM66 AL136164.4-201ENST00000625013 2135 ntBASIC2.53□□□□□ -2
LINC01548A6NM66 PWAR6-201ENST00000552334 4618 ntBASIC2.53□□□□□ -2
LINC01548A6NM66 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01548A6NM66 AC091152.2-201ENST00000591628 2569 ntBASIC2.53□□□□□ -2
LINC01548A6NM66 SNORA38.1-201ENST00000364172 131 ntBASIC2.53□□□□□ -2
LINC01548A6NM66 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.53□□□□□ -2
LINC01548A6NM66 SNORA11.1-201ENST00000408133 129 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms