Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU6-762P-201ENST00000517107 102 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 RN7SL703P-201ENST00000578485 302 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 MIR3117-201ENST00000584034 78 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 RNU6-94P-201ENST00000607728 107 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 AC107294.3-201ENST00000609211 526 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 AC013412.1-201ENST00000610687 192 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 MIR6798-201ENST00000612887 67 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 AL137067.1-201ENST00000615933 120 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 MIR7641-1-201ENST00000627518 61 ntBASIC4.41□□□□□ -1.7
RCCD1A6NED2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.41□□□□□ -1.7
RCCD1A6NED2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCCD1A6NED2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCCD1A6NED2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCCD1A6NED2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCCD1A6NED2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCCD1A6NED2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.4□□□□□ -1.7
RCCD1A6NED2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RCCD1A6NED2 SNORA1-201ENST00000384107 130 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 MIR129-1-201ENST00000384972 72 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 HMGN2P31-201ENST00000432430 273 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 RN7SL98P-201ENST00000462271 300 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 RN7SL481P-201ENST00000477764 299 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 RN7SL459P-201ENST00000481078 302 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 AC006445.1-201ENST00000491925 405 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 AC097462.1-201ENST00000514125 324 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 RNU7-143P-201ENST00000516781 65 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 RNU7-172P-201ENST00000517125 64 ntBASIC4.4□□□□□ -1.71
RCCD1A6NED2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.71
RCCD1A6NED2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.71
RCCD1A6NED2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RCCD1A6NED2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AC002546.1-201ENST00000588041 2504 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AL133243.3-201ENST00000617415 3004 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCCD1A6NED2 RNU6-418P-201ENST00000384035 107 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 SNORA51.10-201ENST00000384418 136 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 RNA5SP332-201ENST00000391063 115 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 AL031121.1-201ENST00000406553 254 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 AC016909.1-201ENST00000415916 166 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AC009220.1-201ENST00000451614 275 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 RPL39P34-201ENST00000477141 156 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 RPL21P129-201ENST00000491732 478 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 MIR4438-201ENST00000585271 93 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AL589743.1-201ENST00000551932 2712 ntBASIC4.39□□□□□ -1.71
RCCD1A6NED2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCCD1A6NED2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCCD1A6NED2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RCCD1A6NED2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RCCD1A6NED2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RCCD1A6NED2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.38□□□□□ -1.71
RCCD1A6NED2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCCD1A6NED2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCCD1A6NED2 Y_RNA.323-201ENST00000365157 109 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 MIR141-201ENST00000384975 95 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 HSPE1P26-201ENST00000405341 275 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 AC006011.1-201ENST00000442758 349 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 snoU13.1-201ENST00000459157 104 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 RNU2-34P-201ENST00000516534 121 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 AP003327.1-201ENST00000529684 127 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.38□□□□□ -1.71
RCCD1A6NED2 AC103810.1-201ENST00000579873 453 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 AC008745.1-201ENST00000604064 271 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 U6.73-201ENST00000619194 103 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCCD1A6NED2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.38□□□□□ -1.71
RCCD1A6NED2 AL596211.1-201ENST00000569873 2277 ntBASIC4.38□□□□□ -1.71
RCCD1A6NED2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RCCD1A6NED2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCCD1A6NED2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCCD1A6NED2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.37□□□□□ -1.71
RCCD1A6NED2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RCCD1A6NED2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCCD1A6NED2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
RCCD1A6NED2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCCD1A6NED2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RCCD1A6NED2 RNU1-32P-201ENST00000363937 159 ntBASIC4.37□□□□□ -1.71
RCCD1A6NED2 AL590004.2-201ENST00000404787 371 ntBASIC4.37□□□□□ -1.71
RCCD1A6NED2 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
RCCD1A6NED2 AC096725.1-201ENST00000514266 313 ntBASIC4.37□□□□□ -1.71
RCCD1A6NED2 SNORA31.21-201ENST00000517180 77 ntBASIC4.37□□□□□ -1.71
RCCD1A6NED2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.37□□□□□ -1.71
RCCD1A6NED2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.37□□□□□ -1.71
RCCD1A6NED2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RCCD1A6NED2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RCCD1A6NED2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RCCD1A6NED2 FAM35DP-201ENST00000323387 2712 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 RNU6-438P-201ENST00000365561 103 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 RPS3AP1-201ENST00000413190 320 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 RN7SL807P-201ENST00000470923 297 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 NIP7P2-201ENST00000485801 544 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 RN7SKP43-201ENST00000516173 320 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms