Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC093331.1-201ENST00000521474 169 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC022080.3-201ENST00000544433 482 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC004817.2-201ENST00000561794 651 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 MIR3616-201ENST00000584070 92 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 RPL17P51-201ENST00000605218 238 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC107871.2-201ENST00000612894 502 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC068205.3-201ENST00000636385 468 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 MIR622-201ENST00000638396 96 ntBASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.23□□□□□ -2.05
IGHV4-28A0A0C4DH34 SNORD113-8-201ENST00000363497 74 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 SNORA71.1-201ENST00000364523 117 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 RNU6-1180P-201ENST00000364935 107 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 RNA5SP240-201ENST00000365355 128 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 RNU6-546P-201ENST00000383991 107 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 Y_RNA.556-201ENST00000384677 113 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 RAB28P5-201ENST00000427490 651 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC104332.2-201ENST00000429959 156 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC022018.1-201ENST00000430685 241 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AL445687.1-201ENST00000439946 251 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 UBBP3-201ENST00000445497 241 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 EEF1B2P7-201ENST00000451177 676 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 SCARNA20.6-201ENST00000517251 106 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC245166.1-201ENST00000521012 253 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC018630.3-201ENST00000542637 96 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC055872.1-201ENST00000570978 278 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC005176.2-201ENST00000596933 147 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AL355297.2-201ENST00000604792 129 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 AC092628.2-201ENST00000622492 339 ntBASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
IGHV4-28A0A0C4DH34 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR22-201ENST00000362190 85 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR148B-201ENST00000362252 99 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 snoU2_19.2-201ENST00000363024 80 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-743P-201ENST00000364151 106 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1305P-201ENST00000364353 104 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORD63-201ENST00000384262 68 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA67.2-201ENST00000384300 149 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1026P-201ENST00000384465 108 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-102P-201ENST00000384485 104 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU4-30P-201ENST00000410245 143 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC092427.1-202ENST00000430569 476 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC117440.1-201ENST00000474107 571 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 TRBVB-201ENST00000477100 408 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 ATP5EP1-201ENST00000510257 156 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.668-201ENST00000516233 93 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU7-110P-201ENST00000516891 62 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNA5SP380-201ENST00000517190 98 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AP002001.1-203ENST00000534002 267 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AK6P2-201ENST00000549020 471 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC004832.5-201ENST00000608677 401 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR1248-201ENST00000629190 106 ntBASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
IGHV4-28A0A0C4DH34 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-545P-201ENST00000362681 104 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.84-201ENST00000363011 104 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA72.2-201ENST00000365028 127 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1175P-201ENST00000365200 107 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.401-201ENST00000383965 117 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.462-201ENST00000384268 102 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA54-201ENST00000384281 123 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.570-201ENST00000384750 101 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 NDUFB4P4-201ENST00000404822 243 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU2-25P-201ENST00000411041 191 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU5A-5P-201ENST00000411054 116 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC009969.1-201ENST00000438726 172 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU1-143P-201ENST00000516296 146 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RN7SKP282-201ENST00000516824 299 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-56P-201ENST00000516986 93 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC109329.2-201ENST00000519658 482 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC022616.8-201ENST00000533569 253 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms