Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 MYL12BP1-201ENST00000569826 507 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 U2.1-201ENST00000618978 145 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 AC137590.2-201ENST00000619709 240 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 SNORD115-32-201ENST00000364079 82 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.214-201ENST00000364201 112 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RNU4-56P-201ENST00000364700 142 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 MIR1289-2-201ENST00000408360 111 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AL590135.1-201ENST00000422215 156 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC019205.3-201ENST00000424573 156 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AIMP1P2-201ENST00000425294 312 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC073910.1-201ENST00000445047 438 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC016700.2-201ENST00000446011 156 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 snoU13.30-201ENST00000458951 104 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 U8.22-201ENST00000459141 133 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RPL23AP70-201ENST00000483361 460 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AF186996.7-201ENST00000492781 209 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-911P-201ENST00000516523 104 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 RAC1P9-201ENST00000604990 392 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AL138825.1-201ENST00000618587 192 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 AL353997.5-201ENST00000618886 171 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 SNORD98-201ENST00000636377 67 ntBASIC3.1□□□□□ -1.91
NR2E3Q9Y5X4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-655P-201ENST00000362858 107 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-238P-201ENST00000363313 106 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 SNORA69.1-201ENST00000390904 137 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 MIR190B-201ENST00000401119 79 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 RNU4-53P-201ENST00000410828 140 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 ELOCP20-201ENST00000422460 345 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC009296.1-201ENST00000443146 155 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 FCF1P4-201ENST00000448326 183 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC087477.1-201ENST00000465747 340 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC090525.1-201ENST00000479116 478 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 HMGB1P35-201ENST00000503360 598 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC144568.1-201ENST00000520139 137 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AL161670.1-201ENST00000554348 137 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC010620.2-201ENST00000600135 313 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 AC100812.1-201ENST00000607622 580 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 RMST_6.1-201ENST00000611980 203 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 MIR7157-201ENST00000635801 60 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 MIR7515-201ENST00000637837 67 ntBASIC3.09□□□□□ -1.91
NR2E3Q9Y5X4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NR2E3Q9Y5X4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
NR2E3Q9Y5X4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.09□□□□□ -1.92
NR2E3Q9Y5X4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.09□□□□□ -1.92
NR2E3Q9Y5X4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NR2E3Q9Y5X4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.164-201ENST00000363709 102 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 RNU1-112P-201ENST00000364401 164 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.276-201ENST00000364732 109 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-806P-201ENST00000365147 105 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-472P-201ENST00000384299 107 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-130P-201ENST00000411112 103 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 EIF4EP4-201ENST00000424916 578 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 AL121594.1-201ENST00000475906 575 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 RNU2-53P-201ENST00000516257 147 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 SNORA31.16-201ENST00000516773 139 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 AC090517.1-201ENST00000569307 266 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR2E3Q9Y5X4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-702P-201ENST00000364982 107 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms