Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AC034114.1-201ENST00000520293 285 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 UBL5P4-201ENST00000562584 236 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AC113195.1-201ENST00000579952 141 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AL355297.2-201ENST00000604792 129 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AL078596.1-201ENST00000624856 447 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AL137790.1-201ENST00000634283 177 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
PCDHGA3Q9Y5H0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 CST9LP2-201ENST00000437612 320 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AC009237.7-201ENST00000447357 229 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 U8.22-201ENST00000459141 133 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AC090515.1-201ENST00000465295 476 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 MIR5006-201ENST00000583027 110 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AL021879.1-201ENST00000611756 288 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 AC010205.1-201ENST00000616668 449 ntBASIC2.97□□□□□ -1.93
PCDHGA3Q9Y5H0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR487A-201ENST00000385009 80 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR329-1-201ENST00000385028 80 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 MRPL35P1-201ENST00000404272 572 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 AC004386.2-201ENST00000441858 148 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 AC025750.2-201ENST00000442609 450 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 AC073910.1-201ENST00000445047 438 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 AC074133.1-201ENST00000515696 183 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1137P-201ENST00000517073 99 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
PCDHGA3Q9Y5H0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORA5B-201ENST00000363786 132 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORA18.2-201ENST00000383865 132 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 PCNPP5-201ENST00000452246 481 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AC091826.1-201ENST00000514065 313 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AC022616.8-201ENST00000533569 253 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AC125232.2-201ENST00000592457 143 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORD11B-201ENST00000607707 90 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 U4atac.1-201ENST00000618345 95 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 AL365361.1-201ENST00000566942 3481 ntBASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA3Q9Y5H0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 MTND5P35-201ENST00000557537 1720 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-318P-201ENST00000384283 103 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORA12-201ENST00000391162 147 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR300-201ENST00000401138 83 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORD12B-201ENST00000410433 91 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AC113618.1-201ENST00000416747 285 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AC023824.2-201ENST00000566185 400 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR4672-201ENST00000583126 81 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AC006023.1-201ENST00000603944 259 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 PRR13P7-201ENST00000605538 430 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AL162730.1-201ENST00000605734 292 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
PCDHGA3Q9Y5H0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms