Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AC000403.1-201ENST00000613696 3585 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-199P-201ENST00000362954 107 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-1210P-201ENST00000363775 107 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 AP002088.1-201ENST00000382740 395 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 RPS29P19-201ENST00000479709 171 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 AC112693.2-201ENST00000556538 232 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 RPL17P51-201ENST00000605218 238 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 TUG1_4.1-201ENST00000619464 181 ntBASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN4Q9Y3Q4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HCN4Q9Y3Q4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HCN4Q9Y3Q4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HCN4Q9Y3Q4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.76
HCN4Q9Y3Q4 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 SNORD114-7-201ENST00000362520 77 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-1205P-201ENST00000363625 106 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 Y_RNA.542-201ENST00000384641 111 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-750P-201ENST00000390946 107 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-1228P-201ENST00000391014 107 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AL031121.1-201ENST00000406553 254 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU7-197P-201ENST00000458836 62 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU7-141P-201ENST00000459304 62 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RPL30P14-201ENST00000482744 348 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RN7SL271P-201ENST00000487601 295 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 SNORA70.12-201ENST00000516084 153 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-919P-201ENST00000516731 104 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AC026241.1-201ENST00000517873 2142 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 MIR4325-201ENST00000583049 90 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AC099778.2-201ENST00000610904 211 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 AC010680.1-201ENST00000590024 3590 ntBASIC4.08□□□□□ -1.76
HCN4Q9Y3Q4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC069528.2-201ENST00000624849 1991 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC007496.3-201ENST00000624987 3443 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-655P-201ENST00000362858 107 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 SNORA20-201ENST00000384662 132 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MIR548B-201ENST00000385247 97 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MIR147B-201ENST00000390185 80 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AL035461.1-201ENST00000421490 332 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC010099.1-201ENST00000455434 375 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-1211P-201ENST00000459179 105 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 RPL21P10-201ENST00000463521 490 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 SRIP1-201ENST00000489235 288 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-1007P-201ENST00000516586 107 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MIR3646-201ENST00000578301 84 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MIR432-201ENST00000606207 94 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.07□□□□□ -1.76
HCN4Q9Y3Q4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 RNA5SP295-201ENST00000362655 121 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 Y_RNA.420-201ENST00000384043 110 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-80P-201ENST00000384195 107 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 RNU2-49P-201ENST00000410666 184 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 MIR1911-201ENST00000410783 80 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AC006461.1-201ENST00000412637 326 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AL121914.1-201ENST00000450188 156 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AC245047.8-201ENST00000456455 284 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AC090877.1-201ENST00000561418 344 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AC002076.2-201ENST00000617362 122 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCN4Q9Y3Q4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms