Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SUB1P3-201ENST00000564581 315 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 SNORD14A-201ENST00000606526 91 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AL355802.3-201ENST00000607571 545 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
LRFN1Q9P244 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRFN1Q9P244 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.58□□□□□ -2
LRFN1Q9P244 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LRFN1Q9P244 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
LRFN1Q9P244 RNU1-35P-201ENST00000362782 153 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 AL357139.1-201ENST00000407792 426 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 SRIP3-201ENST00000413200 219 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 EDDM3CP-201ENST00000415977 425 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 AC027124.2-201ENST00000428249 105 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 AL109933.2-201ENST00000452651 260 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 TOMM22P6-201ENST00000465035 409 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.57□□□□□ -2
LRFN1Q9P244 RNU6-976P-201ENST00000516086 111 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 RNU6-1098P-201ENST00000516772 96 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 RNU6-699P-201ENST00000517081 110 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 SNRPGP20-201ENST00000604477 205 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 TCL6_2.1-201ENST00000615162 119 ntBASIC2.57□□□□□ -2
LRFN1Q9P244 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.57□□□□□ -2
LRFN1Q9P244 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRFN1Q9P244 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
LRFN1Q9P244 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
LRFN1Q9P244 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRFN1Q9P244 RNU6-490P-201ENST00000362985 107 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 Y_RNA.202-201ENST00000364083 110 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 RNU6-245P-201ENST00000384020 107 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 RNA5SP508-201ENST00000411327 119 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.56□□□□□ -2
LRFN1Q9P244 AC018865.2-201ENST00000423631 129 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 PRELID3BP1-201ENST00000457142 540 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 SNORD109B-201ENST00000458961 67 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 SNORD109A-201ENST00000459128 67 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 AC233702.2-202ENST00000562547 291 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 AC004584.2-201ENST00000570407 410 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 MIR3126-201ENST00000577443 74 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
LRFN1Q9P244 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.56□□□□□ -2
LRFN1Q9P244 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.56□□□□□ -2
LRFN1Q9P244 MIR6733-201ENST00000635723 61 ntBASIC2.56□□□□□ -2
LRFN1Q9P244 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRFN1Q9P244 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRFN1Q9P244 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRFN1Q9P244 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRFN1Q9P244 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
LRFN1Q9P244 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
LRFN1Q9P244 RNA5SP432-201ENST00000362480 116 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 Y_RNA.28-201ENST00000362554 111 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 SNORA22B-201ENST00000383876 138 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 Y_RNA.577-201ENST00000384794 101 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 RNU6-159P-201ENST00000391080 106 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 RNU1-139P-201ENST00000391307 165 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 MIR190B-201ENST00000401119 79 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 RPS23P5-201ENST00000495419 428 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.55□□□□□ -2
LRFN1Q9P244 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
LRFN1Q9P244 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.55□□□□□ -2
LRFN1Q9P244 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
LRFN1Q9P244 ZNF204P-201ENST00000416749 2397 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 Y_RNA.252-201ENST00000364556 101 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 RNU6-99P-201ENST00000364721 107 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.54□□□□□ -2
LRFN1Q9P244 AC092423.1-201ENST00000430165 186 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AC009237.7-201ENST00000447357 229 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 HMGN2P18-201ENST00000450680 270 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.54□□□□□ -2
LRFN1Q9P244 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AP000870.1-201ENST00000472927 406 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AC093259.1-201ENST00000509755 300 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 Y_RNA.661-201ENST00000516003 99 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 RNU2-44P-201ENST00000516795 194 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 PRELID2P1-201ENST00000552837 301 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 AC040896.1-201ENST00000613819 479 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
LRFN1Q9P244 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
LRFN1Q9P244 RNU6-859P-201ENST00000362728 107 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 Y_RNA.162-201ENST00000363683 102 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNU5F-3P-201ENST00000363767 117 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms