Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA3.2-201ENST00000408221 125 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 Y_RNA.592-201ENST00000410274 109 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 RNA5SP508-201ENST00000411327 119 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.82□□□□□ -1.96
COL20A1Q9P218 CBX3P6-201ENST00000430257 527 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 RNU6-1114P-201ENST00000516022 107 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 SCARNA15.1-201ENST00000516384 125 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL20A1Q9P218 AC027288.2-201ENST00000553028 243 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.82□□□□□ -1.96
COL20A1Q9P218 VN1R91P-201ENST00000594377 169 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.82□□□□□ -1.96
COL20A1Q9P218 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.82□□□□□ -1.96
COL20A1Q9P218 MTND5P16-201ENST00000460269 1703 ntBASIC2.82□□□□□ -1.96
COL20A1Q9P218 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL20A1Q9P218 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
COL20A1Q9P218 Y_RNA.132-201ENST00000363421 102 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 SNORD114-30-201ENST00000364448 72 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 SNORA33.2-201ENST00000365413 134 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 Y_RNA.358-201ENST00000365491 99 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 RNU1-139P-201ENST00000391307 165 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 MTCO3P19-201ENST00000415864 321 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
COL20A1Q9P218 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.81□□□□□ -1.96
COL20A1Q9P218 RNU7-169P-201ENST00000459456 61 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 AP000870.1-201ENST00000472927 406 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 SNORA40.14-201ENST00000516543 86 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 HSPE1P18-201ENST00000517602 280 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
COL20A1Q9P218 SNORD53-201ENST00000579969 78 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 AC016925.2-201ENST00000605108 242 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 AC007485.1-201ENST00000616755 206 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 U2.1-201ENST00000618978 145 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 MIR4272-201ENST00000635924 64 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 BX322639.1-202ENST00000423987 2213 ntBASIC2.81□□□□□ -1.96
COL20A1Q9P218 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL20A1Q9P218 RNU6-874P-201ENST00000362390 105 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 Y_RNA.80-201ENST00000362996 102 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 Y_RNA.148-201ENST00000363557 117 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 RNA5SP456-201ENST00000364002 114 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 Y_RNA.216-201ENST00000364205 93 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 RNU6-245P-201ENST00000384020 107 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 Y_RNA.526-201ENST00000384572 110 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 RNU6-159P-201ENST00000391080 106 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 Y_RNA.597-201ENST00000410463 100 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC090515.1-201ENST00000465295 476 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC132942.1-201ENST00000486753 483 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 RN7SL636P-201ENST00000497504 294 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 RNU4-77P-201ENST00000516692 156 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 SNORA31.26-201ENST00000517250 137 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 CBX3P7-201ENST00000532876 502 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC006504.6-201ENST00000590142 199 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC046143.2-201ENST00000609789 160 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
COL20A1Q9P218 Z82209.1-201ENST00000422141 2135 ntBASIC2.8□□□□□ -1.96
COL20A1Q9P218 AC005592.1-201ENST00000566527 1640 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 RNU6-639P-201ENST00000384074 107 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 MIR95-201ENST00000385072 81 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 MRPL42P3-201ENST00000401492 326 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 MIR1294-201ENST00000408503 142 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 RNU2-25P-201ENST00000411041 191 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 OOSP1P1-201ENST00000423265 274 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 HSBP1P1-201ENST00000555205 166 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 AC090517.1-201ENST00000569307 266 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 AC006600.1-201ENST00000572529 153 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 AC016727.2-201ENST00000603988 621 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 AC116312.1-201ENST00000606841 314 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
COL20A1Q9P218 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
COL20A1Q9P218 ZNF204P-201ENST00000416749 2397 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 RNU6-1274P-201ENST00000384557 107 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 Y_RNA.557-201ENST00000384680 107 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC003685.2-201ENST00000422795 395 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AL160004.2-201ENST00000432935 350 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 RNA5SP24-201ENST00000516478 95 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 SNORA48.11-201ENST00000517015 89 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 RN7SKP40-201ENST00000517211 242 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 364.7 ms