Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FCF1P4-201ENST00000448326 183 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AC117440.1-201ENST00000474107 571 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 HMGN1P10-201ENST00000474557 553 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AC010655.3-201ENST00000478818 450 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AC067942.3-201ENST00000512025 362 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 RNU6-965P-201ENST00000516721 96 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AC131281.1-201ENST00000522984 164 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AL117187.1-201ENST00000555482 181 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 MIR4429-201ENST00000580105 73 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 MIR4659A-201ENST00000580269 81 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 UBL5P2-201ENST00000583788 219 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 RNU6-727P-201ENST00000363592 107 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 RNU6-234P-201ENST00000365229 104 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 RNU6-926P-201ENST00000384075 107 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 RNU6-1105P-201ENST00000384774 107 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 MIR561-201ENST00000385216 97 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AL033519.2-201ENST00000403958 392 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 MRPL35P1-201ENST00000404272 572 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AC073910.1-201ENST00000445047 438 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 IFNA11P-201ENST00000446352 526 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 PCNPP5-201ENST00000452246 481 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 MTATP8P1-201ENST00000467115 207 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 MRPS35P2-201ENST00000508242 191 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 RAC1P9-201ENST00000604990 392 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 SNORD11B-201ENST00000607707 90 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AL357075.2-201ENST00000614906 189 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 MIR1248-201ENST00000629190 106 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
MKS1Q9NXB0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 MIR670-201ENST00000390142 98 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 SNORA11-201ENST00000408789 128 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 RNU6-130P-201ENST00000411112 103 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 SNORA40.9-201ENST00000515895 93 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC109329.2-201ENST00000519658 482 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC011476.5-201ENST00000615594 130 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 MIR6075-201ENST00000620782 95 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
MKS1Q9NXB0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.92□□□□□ -1.94
MKS1Q9NXB0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.133-201ENST00000363428 110 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU6-611P-201ENST00000384276 104 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 SNORA67.2-201ENST00000384300 149 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU2-48P-201ENST00000410694 191 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU7-14P-201ENST00000459331 62 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RN7SL293P-201ENST00000481765 281 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AC074133.1-201ENST00000515696 183 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU6-397P-201ENST00000516226 104 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU6-897P-201ENST00000517135 105 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RRN3P3-201ENST00000549207 578 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 MIR4444-1-201ENST00000581696 74 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 MIR4444-2-201ENST00000584390 74 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AC068205.3-201ENST00000636385 468 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AC009487.2-201ENST00000420969 6821 ntBASIC2.91□□□□□ -1.94
MKS1Q9NXB0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
MKS1Q9NXB0 RNU6-1309P-201ENST00000363305 108 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 MIR23B-201ENST00000384832 97 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 MIR181A2-201ENST00000384863 110 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 MIR7-3-201ENST00000384898 110 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RNA5SP504-201ENST00000410676 117 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms