Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
SMCO4Q9NRQ5 AC024995.1-201ENST00000523014 93 ntBASIC-1.34□□□□□ -2.62
SMCO4Q9NRQ5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.34□□□□□ -2.62
SMCO4Q9NRQ5 AP000484.1-201ENST00000620067 1252 ntBASIC-1.34□□□□□ -2.62
SMCO4Q9NRQ5 MIR8054-201ENST00000620877 86 ntBASIC-1.34□□□□□ -2.62
SMCO4Q9NRQ5 AC005042.3-201ENST00000453230 174 ntBASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 AC109445.1-201ENST00000512356 383 ntBASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 RNA5SP135-201ENST00000517019 125 ntBASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 LRRC6P1-201ENST00000532188 885 ntBASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 AC018889.1-201ENST00000605372 397 ntBASIC-1.35□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-28P-201ENST00000362378 107 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-432P-201ENST00000384196 109 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 MIR604-201ENST00000384880 94 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 MIR760-201ENST00000390220 80 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 RNA5SP163-201ENST00000410304 99 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AC114982.2-201ENST00000461396 358 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AC025465.4-201ENST00000513422 638 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-143P-201ENST00000516942 93 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AC013828.2-201ENST00000532487 235 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AL136363.2-201ENST00000604173 851 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 uc_338.28-201ENST00000612082 187 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 AC006504.8-201ENST00000621046 635 ntBASIC-1.36□□□□□ -2.63
SMCO4Q9NRQ5 MTND5P32-201ENST00000560711 1802 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 SNORA25.7-201ENST00000364375 127 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-359P-201ENST00000365466 108 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 SNORD116-20-201ENST00000384529 92 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AL022718.1-201ENST00000412004 84 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 TIMM9P3-201ENST00000428659 274 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AC107401.1-201ENST00000503426 685 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-848P-201ENST00000515948 107 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-617P-201ENST00000516147 107 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-473P-201ENST00000516164 107 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AC023538.1-201ENST00000534576 736 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AL606834.3-201ENST00000602615 496 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 AC093875.1-201ENST00000623688 504 ntBASIC-1.37□□□□□ -2.63
SMCO4Q9NRQ5 RNU4-15P-201ENST00000362613 141 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 RNU4-73P-201ENST00000363164 141 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 RPS20P2-201ENST00000402520 389 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 RPS26P42-201ENST00000413485 326 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 SNORA31.3-201ENST00000516029 96 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 RNU2-46P-201ENST00000517038 113 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 AC095057.3-201ENST00000567102 1157 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 AC246785.4-201ENST00000605374 287 ntBASIC-1.38□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-369P-201ENST00000362515 102 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 SNORD114-11-201ENST00000363738 75 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AC083799.1-201ENST00000366451 910 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 MIR1912-201ENST00000410389 80 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 RN7SKP142-201ENST00000411236 328 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 COX7BP2-201ENST00000437976 242 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AL122001.1-201ENST00000457027 370 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AL355073.2-201ENST00000612106 557 ntBASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-1.39□□□□□ -2.63
SMCO4Q9NRQ5 MTCO2P5-201ENST00000422621 426 ntBASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 RNU7-14P-201ENST00000459331 62 ntBASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 RNU6-180P-201ENST00000516697 61 ntBASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 AC091946.2-201ENST00000606105 291 ntBASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 AL162726.3-218ENST00000636401 95 ntBASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.4□□□□□ -2.63
SMCO4Q9NRQ5 SNORD49B-201ENST00000365172 72 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 RNU6-440P-201ENST00000390882 105 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AL663109.1-201ENST00000411498 844 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 USP9YP25-201ENST00000457708 443 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 MIR4263-201ENST00000584745 83 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AL162424.1-201ENST00000602325 221 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AC022217.4-201ENST00000604389 163 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AC122133.1-201ENST00000613964 233 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AC131159.1-201ENST00000621854 213 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 AL450472.1-202ENST00000637286 180 ntBASIC-1.41□□□□□ -2.64
SMCO4Q9NRQ5 BX322639.1-202ENST00000423987 2213 ntBASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 SNORD114-14-201ENST00000362723 75 ntBASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 Y_RNA.132-201ENST00000363421 102 ntBASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 RNU4-63P-201ENST00000411313 118 ntBASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.42□□□□□ -2.64
SMCO4Q9NRQ5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms