Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNU6-799P-201ENST00000363567 107 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 RNU6-1048P-201ENST00000364054 107 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 Y_RNA.572-201ENST00000384757 98 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 AC002075.2-201ENST00000425207 252 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.22□□□□□ -1.73
EFCC1Q9HA90 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.22□□□□□ -1.73
EFCC1Q9HA90 RPL30P5-201ENST00000494923 336 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 RNU6-1282P-201ENST00000516735 96 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 RNU6-928P-201ENST00000516876 104 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 AC100767.1-201ENST00000528178 123 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 AC008011.1-201ENST00000545989 227 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 MIR7112-201ENST00000616126 65 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 SNORA50A-202ENST00000629536 136 ntBASIC4.22□□□□□ -1.73
EFCC1Q9HA90 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFCC1Q9HA90 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
EFCC1Q9HA90 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.22□□□□□ -1.73
EFCC1Q9HA90 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.127-201ENST00000363386 109 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.415-201ENST00000384012 112 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 AL133475.1-201ENST00000404414 305 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 U3.40-201ENST00000408706 208 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 RNA5SP129-201ENST00000410276 118 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 AC096649.2-201ENST00000416186 393 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 AC099548.1-201ENST00000421443 426 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 RPS27AP10-201ENST00000496103 208 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.686-201ENST00000516548 134 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.21□□□□□ -1.74
EFCC1Q9HA90 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
EFCC1Q9HA90 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.273-201ENST00000364703 102 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-1325P-201ENST00000364905 105 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-578P-201ENST00000390980 103 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNA5SP424-201ENST00000390988 115 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-381P-201ENST00000391259 108 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 EBAG9P1-201ENST00000418955 543 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RPL26P9-201ENST00000457466 433 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC103975.1-201ENST00000482506 483 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-436P-201ENST00000516171 114 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-1007P-201ENST00000516586 107 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNU6-919P-201ENST00000516731 104 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC090877.1-201ENST00000561418 344 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 MIR4425-201ENST00000580572 84 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 MIR4744-201ENST00000581563 82 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC006386.2-201ENST00000624491 75 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC012005.1-201ENST00000624575 75 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.2□□□□□ -1.74
EFCC1Q9HA90 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.2□□□□□ -1.74
EFCC1Q9HA90 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 snoU2_19.4-201ENST00000364329 80 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 SNORA18.3-201ENST00000384122 132 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 SNORD37.2-201ENST00000391075 66 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 SNORA26.5-201ENST00000391215 123 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 RN7SKP284-201ENST00000411002 343 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 AC006461.1-201ENST00000412637 326 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 DBIP2-201ENST00000419076 262 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 COTL1P1-201ENST00000422309 375 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 MIR4431-201ENST00000579990 94 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 SNORD98-201ENST00000636377 67 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.19□□□□□ -1.74
EFCC1Q9HA90 AL672296.1-201ENST00000427780 2158 ntBASIC4.19□□□□□ -1.74
EFCC1Q9HA90 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.24-201ENST00000362508 103 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 RNU4-35P-201ENST00000362588 141 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 RNU6-801P-201ENST00000364087 105 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.542-201ENST00000384641 111 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 MIR888-201ENST00000401186 77 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 MIR320B2-201ENST00000408479 138 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 AC107027.2-201ENST00000512197 115 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 DNAJC19P2-201ENST00000593340 302 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 AC008873.1-201ENST00000625051 138 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 AP000553.6-201ENST00000641242 118 ntBASIC4.18□□□□□ -1.74
EFCC1Q9HA90 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
EFCC1Q9HA90 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms