Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 CEP170P1-201ENST00000502249 4587 ntBASIC4.19□□□□□ -1.74
NUCKS1Q9H1E3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 SNORA57.1-201ENST00000391227 145 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 RNY4P30-201ENST00000410216 95 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 Y_RNA.622-201ENST00000411091 108 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AC245047.4-201ENST00000433189 144 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 HMGN2P10-201ENST00000448085 265 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 RPS29P24-201ENST00000486345 171 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 RNU5F-2P-201ENST00000516066 82 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 RNU1-117P-201ENST00000517041 158 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 MIR378D2-201ENST00000580636 98 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AC025754.2-201ENST00000606491 432 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AC018692.3-201ENST00000623929 123 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 AC002543.1-201ENST00000299783 1954 ntBASIC4.18□□□□□ -1.74
NUCKS1Q9H1E3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 Y_RNA.114-201ENST00000363265 113 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 AL691449.1-201ENST00000426570 421 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 RPS29P20-201ENST00000489592 171 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 TRBV12-2-201ENST00000489763 344 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 ACA59.2-201ENST00000517061 156 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 AC093331.1-201ENST00000521474 169 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 MIR6875-201ENST00000617506 72 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.17□□□□□ -1.74
NUCKS1Q9H1E3 AC138915.1-201ENST00000565427 1685 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 SNORD58C-201ENST00000365223 64 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 AC027124.2-201ENST00000428249 105 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 AL031737.1-201ENST00000450125 223 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 SNRPGP8-201ENST00000454064 226 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RPS4XP2-201ENST00000458402 793 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RN7SL132P-201ENST00000478131 296 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 Y_RNA.677-201ENST00000516401 85 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RN7SKP83-201ENST00000516512 178 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RNA5SP164-201ENST00000516533 110 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 RNU6-537P-201ENST00000517277 103 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 AC004832.5-201ENST00000608677 401 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 AC005562.2-201ENST00000618264 111 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 MIR6500-201ENST00000622700 86 ntBASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.16□□□□□ -1.74
NUCKS1Q9H1E3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUCKS1Q9H1E3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUCKS1Q9H1E3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUCKS1Q9H1E3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 RNU1-75P-201ENST00000347264 129 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 Y_RNA.120-201ENST00000363304 110 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 MIR1278-201ENST00000408753 81 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 RNA5SP201-201ENST00000410316 124 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 CYCSP48-201ENST00000417124 323 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 MLLT10P1-201ENST00000418346 262 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 HSPE1P21-201ENST00000438283 308 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 AC004386.2-201ENST00000441858 148 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 AC117454.1-201ENST00000491120 168 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 RN7SL703P-201ENST00000578485 302 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 AL034555.1-201ENST00000604816 211 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 TCL6_2.1-201ENST00000615162 119 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 MIR548AY-201ENST00000617669 107 ntBASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
NUCKS1Q9H1E3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 Y_RNA.116-201ENST00000363292 103 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 RNA5SP97-201ENST00000365006 84 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 SNORA79-201ENST00000408376 140 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 SNORA36B-201ENST00000410438 131 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AL591419.1-201ENST00000427423 339 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 SNORA70.12-201ENST00000516084 153 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms