Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TCL6_2.1-201ENST00000615162 119 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 Y_RNA.787-201ENST00000616522 101 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 Y_RNA.780-201ENST00000617336 101 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 AC007742.2-201ENST00000618226 398 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 Y_RNA.801-201ENST00000619005 101 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 AC243829.7-201ENST00000633081 225 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS1Q99742 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS1Q99742 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
NPAS1Q99742 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS1Q99742 AC005592.1-201ENST00000566527 1640 ntBASIC2.5□□□□□ -2.01
NPAS1Q99742 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC091812.1-201ENST00000432235 1948 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 RNU1-23P-201ENST00000363361 144 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 RNU6-525P-201ENST00000363685 104 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC117470.1-201ENST00000381974 330 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NPAS1Q99742 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS1Q99742 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 MTCYBP6-201ENST00000441810 138 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 MTCO3P8-201ENST00000453691 755 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS1Q99742 U8.22-201ENST00000459141 133 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC007215.1-201ENST00000464893 276 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 MIR2355-201ENST00000517199 87 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.49□□□□□ -2.01
NPAS1Q99742 AC093023.1-201ENST00000547375 507 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 GTF3AP2-201ENST00000557014 266 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS1Q99742 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS1Q99742 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS1Q99742 MIR4272-201ENST00000635924 64 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 BX322639.1-202ENST00000423987 2213 ntBASIC2.49□□□□□ -2.01
NPAS1Q99742 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPAS1Q99742 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NPAS1Q99742 Y_RNA.148-201ENST00000363557 117 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 Y_RNA.179-201ENST00000363844 90 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 SNORD115-8-201ENST00000363856 82 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 SNORD32B-201ENST00000364460 84 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 SNORD115-38-201ENST00000365037 82 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 Y_RNA.389-201ENST00000383924 113 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 Y_RNA.422-201ENST00000384054 114 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 RNU6-639P-201ENST00000384074 107 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 MIR10B-201ENST00000385011 110 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 MRPL42P3-201ENST00000401492 326 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 AL033519.2-201ENST00000403958 392 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 RNU2-52P-201ENST00000410680 190 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS1Q99742 AC009238.1-201ENST00000442165 424 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS1Q99742 AC009237.6-201ENST00000446969 424 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 RNU7-14P-201ENST00000459331 62 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 SNORA48.11-201ENST00000517015 89 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 AC006504.6-201ENST00000590142 199 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 AC010999.1-201ENST00000611856 324 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 AC091925.1-201ENST00000623204 462 ntBASIC2.48□□□□□ -2.01
NPAS1Q99742 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NPAS1Q99742 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS1Q99742 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.47□□□□□ -2.01
NPAS1Q99742 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPAS1Q99742 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU6-727P-201ENST00000363592 107 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU6-438P-201ENST00000365561 103 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 SNORD14.1-201ENST00000365609 90 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU6-245P-201ENST00000384020 107 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU1-139P-201ENST00000391307 165 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
NPAS1Q99742 CHEK2P4-201ENST00000450340 246 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU6-1098P-201ENST00000516772 96 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 RNU1-117P-201ENST00000517041 158 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.47□□□□□ -2.01
NPAS1Q99742 RPL17P51-201ENST00000605218 238 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
NPAS1Q99742 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.47□□□□□ -2.01
NPAS1Q99742 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPAS1Q99742 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPAS1Q99742 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPAS1Q99742 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
NPAS1Q99742 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPAS1Q99742 AL365361.1-201ENST00000566942 3481 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPAS1Q99742 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
NPAS1Q99742 Y_RNA.326-201ENST00000365176 113 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 RNU6-234P-201ENST00000365229 104 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 SNORA33.2-201ENST00000365413 134 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 RNU6-926P-201ENST00000384075 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms