Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 AL590240.4-201ENST00000616908 390 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 SCARNA15.3-201ENST00000626315 122 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 SCARNA4.1-201ENST00000628597 123 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 AL365361.1-201ENST00000566942 3481 ntBASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3RF2Q8TEC5 AC069528.2-201ENST00000624849 1991 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 MIR410-201ENST00000362222 80 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 Y_RNA.136-201ENST00000363444 102 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AC097463.2-201ENST00000421074 142 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RAB28P5-201ENST00000427490 651 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RPS27P26-201ENST00000494583 239 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AC145146.1-201ENST00000496370 254 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RNU6-344P-201ENST00000516635 111 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AL162424.1-201ENST00000602325 221 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 AC005562.2-201ENST00000618264 111 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.25□□□□□ -1.89
SH3RF2Q8TEC5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 Y_RNA.297-201ENST00000364950 91 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 MIR1298-201ENST00000408783 112 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 RNA5SP475-201ENST00000410568 110 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 AL139156.1-201ENST00000412785 841 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 AL670379.2-201ENST00000604983 252 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 SNORD11B-201ENST00000607707 90 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 GABRG2-229ENST00000641017 3628 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF2Q8TEC5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 RNU1-75P-201ENST00000347264 129 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 Y_RNA.83-201ENST00000363005 113 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 Y_RNA.383-201ENST00000383855 97 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 SNORA54-201ENST00000384281 123 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 SNORA11.2-201ENST00000408318 127 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 PIGPP3-201ENST00000425307 415 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 RNA5SP112-201ENST00000515937 99 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AC093732.2-201ENST00000607950 274 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF2Q8TEC5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 UBE2WP1-201ENST00000362030 340 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 SNORA71.1-201ENST00000364523 117 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MIR549A-201ENST00000385268 96 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 ELOCP21-201ENST00000412558 336 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 AC027124.2-201ENST00000428249 105 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 Z98742.2-201ENST00000431564 187 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 COX6CP14-201ENST00000469580 174 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MIR5047-201ENST00000579212 100 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MIR4765-201ENST00000585007 77 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 AC004467.1-201ENST00000615678 330 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 MIR3674-201ENST00000636576 68 ntBASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms