Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RNU6-111P-201ENST00000517179 105 ntBASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 HSPE1P18-201ENST00000517602 280 ntBASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 RPL30P11-203ENST00000598995 310 ntBASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 AC127459.3-201ENST00000624328 466 ntBASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH19Q8TAB3 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RNU6-727P-201ENST00000363592 107 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 MIR634-201ENST00000385208 97 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 AC004386.2-201ENST00000441858 148 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RPL31P41-201ENST00000477967 372 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 HMGB3P17-201ENST00000504195 649 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RNU6-344P-201ENST00000516635 111 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RNU2-31P-201ENST00000516954 155 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 RPL17P51-201ENST00000605218 238 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 AC006001.4-201ENST00000622243 395 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
PCDH19Q8TAB3 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 RNU6-1266P-201ENST00000362794 105 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 MIR29B2-201ENST00000385055 81 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 MIR5006-201ENST00000583027 110 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 AC010900.2-201ENST00000604508 210 ntBASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDH19Q8TAB3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 SNORA18.2-201ENST00000383865 132 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 RNU6-338P-201ENST00000383888 105 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 ELOCP21-201ENST00000412558 336 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 RAB28P5-201ENST00000427490 651 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AC009237.7-201ENST00000447357 229 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 RNU2-44P-201ENST00000516795 194 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 MIR5004-201ENST00000579078 107 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AC008749.1-201ENST00000597650 306 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AC022441.3-201ENST00000605737 136 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 SNORD11B-201ENST00000607707 90 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 U2.14-201ENST00000615943 113 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDH19Q8TAB3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 RNA5SP475-201ENST00000410568 110 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AC005042.3-201ENST00000453230 174 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 MIR4325-201ENST00000583049 90 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 AC090517.3-201ENST00000625170 141 ntBASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDH19Q8TAB3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms