Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6-498P-201ENST00000459468 107 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC89Q8N998 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 Y_RNA.665-201ENST00000516177 98 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNU6-506P-201ENST00000516553 94 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNA5SP384-201ENST00000516615 116 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNA5SP481-201ENST00000516814 122 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 AC016957.1-201ENST00000534895 309 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 SNORA59B-202ENST00000578183 701 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 MIR4435-1-201ENST00000582552 80 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 MIR3976-201ENST00000606807 139 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 AL353149.1-201ENST00000610667 244 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CCDC89Q8N998 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC89Q8N998 RNY3P3-201ENST00000363816 102 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 RNU6-975P-201ENST00000384296 105 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 Y_RNA.530-201ENST00000384587 101 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 MIR634-201ENST00000385208 97 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC89Q8N998 CST2P1-201ENST00000425770 87 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 MTCO3P29-201ENST00000432119 779 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 PCMTD1P1-201ENST00000455560 355 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 snoU13.30-201ENST00000458951 104 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 RNU6-314P-201ENST00000516574 104 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AK6P1-201ENST00000540219 478 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC084364.2-201ENST00000546924 395 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC89Q8N998 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC89Q8N998 AC099654.12-201ENST00000639868 649 ntBASIC1.93□□□□□ -2.1
CCDC89Q8N998 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC89Q8N998 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC89Q8N998 RNU4-24P-201ENST00000364565 139 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 AL117342.1-201ENST00000404861 406 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 ZNF885P-201ENST00000420174 1098 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC89Q8N998 MTATP6P26-201ENST00000445926 662 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 RNU7-187P-201ENST00000458985 68 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 HMGN2P26-201ENST00000463169 339 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 RPL26P26-201ENST00000480251 434 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC89Q8N998 AC008549.1-201ENST00000512900 643 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC89Q8N998 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC89Q8N998 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC89Q8N998 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC89Q8N998 SCARNA4-201ENST00000629045 128 ntBASIC1.92□□□□□ -2.1
CCDC89Q8N998 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC89Q8N998 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC89Q8N998 Y_RNA.67-201ENST00000362870 100 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC89Q8N998 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 RNA5SP54-201ENST00000516951 92 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC89Q8N998 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC89Q8N998 AC126177.8-201ENST00000618339 1015 ntBASIC1.91□□□□□ -2.1
CCDC89Q8N998 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC89Q8N998 Y_RNA.38-201ENST00000362617 102 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 RNU6-451P-201ENST00000362921 107 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 Y_RNA.151-201ENST00000363566 112 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 Y_RNA.256-201ENST00000364594 104 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 MIR549A-201ENST00000385268 96 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC89Q8N998 HMGN2P9-201ENST00000476875 229 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CCDC89Q8N998 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
CCDC89Q8N998 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 RNU6-1198P-201ENST00000516904 67 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC89Q8N998 MIR6852-201ENST00000621699 66 ntBASIC1.9□□□□□ -2.11
CCDC89Q8N998 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC89Q8N998 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC89Q8N998 RNU6-1252P-201ENST00000363054 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms