Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MIR1294-201ENST00000408503 142 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC003685.2-201ENST00000422795 395 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC022018.1-201ENST00000430685 241 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC073910.1-201ENST00000445047 438 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 MTND4LP30-201ENST00000454092 297 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 RNU7-87P-201ENST00000459343 62 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC025465.3-201ENST00000510570 311 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 RNU6-1023P-201ENST00000516137 106 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AL137100.2-201ENST00000555786 315 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC104581.2-201ENST00000572227 430 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 MIR5195-201ENST00000583555 115 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT78Q8N1N4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AC073346.2-201ENST00000624724 2058 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRT78Q8N1N4 AL355596.1-201ENST00000565399 3996 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 MIR422A-201ENST00000362286 90 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 SNORA19-201ENST00000384737 128 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 MIR625-201ENST00000385047 85 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 MIR561-201ENST00000385216 97 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AL138885.1-201ENST00000405921 675 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RPS26P42-201ENST00000413485 326 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RPS3AP12-201ENST00000443616 753 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RPL39P38-201ENST00000467018 153 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RNU6-138P-201ENST00000515952 107 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 SNORA48.11-201ENST00000517015 89 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 RRN3P3-201ENST00000549207 578 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AC090517.1-201ENST00000569307 266 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AC010928.2-201ENST00000588017 287 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AC005520.5-201ENST00000613926 164 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 MIR3651-201ENST00000630427 90 ntBASIC2.85□□□□□ -1.95
KRT78Q8N1N4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KRT78Q8N1N4 MTND5P6-201ENST00000422338 1798 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.319-201ENST00000365138 92 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RNU6-546P-201ENST00000383991 107 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 SNORA12-201ENST00000391162 147 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RNU2-32P-201ENST00000411193 191 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 MTCO3P8-201ENST00000453691 755 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AP000705.1-201ENST00000454567 350 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RNU6-397P-201ENST00000516226 104 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 SNORA40.14-201ENST00000516543 86 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RNU6-570P-201ENST00000517051 105 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 RAC1P9-201ENST00000604990 392 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AC098479.1-201ENST00000609225 154 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 MIR8057-201ENST00000620957 69 ntBASIC2.84□□□□□ -1.95
KRT78Q8N1N4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT78Q8N1N4 AP006437.1-201ENST00000641440 3685 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT78Q8N1N4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU6-770P-201ENST00000363929 105 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU6-944P-201ENST00000364023 107 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU4-42P-201ENST00000364738 142 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 Y_RNA.562-201ENST00000384695 113 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 Y_RNA.577-201ENST00000384794 101 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR190B-201ENST00000401119 79 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.83□□□□□ -1.96
KRT78Q8N1N4 AC139712.2-201ENST00000424302 339 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU7-169P-201ENST00000459456 61 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNA5SP54-201ENST00000516951 92 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU7-4P-201ENST00000516961 62 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU6-789P-201ENST00000517105 102 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 RNU6-111P-201ENST00000517179 105 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.83□□□□□ -1.96
KRT78Q8N1N4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT78Q8N1N4 AC006600.1-201ENST00000572529 153 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR5701-3-201ENST00000578890 82 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR5701-1-201ENST00000585138 82 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR1244-1-201ENST00000612829 85 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR5701-2-201ENST00000615634 82 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR1244-3-201ENST00000635744 85 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR1244-2-201ENST00000636449 85 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 MIR1244-4-202ENST00000636813 85 ntBASIC2.83□□□□□ -1.96
KRT78Q8N1N4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms