Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORA48.5-201ENST00000391143 135 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RNU6-588P-201ENST00000410281 105 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RPL36AP48-201ENST00000485521 314 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RN7SL323P-201ENST00000494712 295 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 CYCSP30-201ENST00000546447 172 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AC079598.5-201ENST00000547460 117 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 MIR5688-201ENST00000580619 83 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RPL17P51-201ENST00000605218 238 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 AC025754.2-201ENST00000606491 432 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF135Q8IUD6 RNA5SP104-201ENST00000410989 118 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 RPS29P4-201ENST00000414733 161 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 RPS29P2-201ENST00000479278 136 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 AC025445.1-201ENST00000502728 300 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 RNU6-772P-201ENST00000516042 105 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 AC108081.1-201ENST00000604358 221 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 uc_338.14-201ENST00000613162 166 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 AL591926.4-201ENST00000616895 298 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 U6.95-201ENST00000636931 70 ntBASIC4.26□□□□□ -1.73
RNF135Q8IUD6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF135Q8IUD6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF135Q8IUD6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF135Q8IUD6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 RNU6-1305P-201ENST00000364353 104 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.294-201ENST00000364916 102 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 RNVU1-14-201ENST00000384770 164 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MIR586-201ENST00000385035 97 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MT-TT-201ENST00000387460 66 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 SNORA40.5-201ENST00000391061 128 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MIR1302-4-201ENST00000408701 150 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 HSPE1P13-201ENST00000451143 297 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 MIR3124-201ENST00000582636 67 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF135Q8IUD6 AL353746.1-201ENST00000566293 6881 ntBASIC4.25□□□□□ -1.73
RNF135Q8IUD6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 U8.7-201ENST00000364940 136 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 AP002088.1-201ENST00000382740 395 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.393-201ENST00000383936 102 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.521-201ENST00000384560 114 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 RPS27P1-201ENST00000450552 247 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 RN7SL293P-201ENST00000481765 281 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 RNU6-561P-201ENST00000516222 102 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 NDUFA5P6-201ENST00000542110 379 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 U3.45-201ENST00000607547 219 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 MIR7975-201ENST00000619350 68 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 SCARNA15.3-201ENST00000626315 122 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 SCARNA4.1-201ENST00000628597 123 ntBASIC4.24□□□□□ -1.73
RNF135Q8IUD6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF135Q8IUD6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 ZNF962P-201ENST00000443465 3140 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 MTCO1P44-201ENST00000441935 243 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 SNORA31.1-201ENST00000515993 133 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 SNORA31.5-201ENST00000516190 133 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 SNORD33.1-201ENST00000516213 88 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms