Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 ELOCP20-201ENST00000422460 345 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 IFNA11P-201ENST00000446352 526 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 RPS23P5-201ENST00000495419 428 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 SNORA40.9-201ENST00000515895 93 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 DEFB131C-201ENST00000528817 165 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AC018630.3-201ENST00000542637 96 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM3Q86VH5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 RNU6-944P-201ENST00000364023 107 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 U8.9-201ENST00000365667 134 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AL079342.1-201ENST00000401460 267 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AC107083.1-201ENST00000439643 279 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 DYNLT3P2-201ENST00000442517 295 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AC025750.2-201ENST00000442609 450 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 UQCRBP2-201ENST00000447827 297 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AC074133.1-201ENST00000515696 183 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AC023824.2-201ENST00000566185 400 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AP000942.4-201ENST00000604811 241 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 SNORD11B-201ENST00000607707 90 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM3Q86VH5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 Y_RNA.19-201ENST00000362462 99 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 RNU6-727P-201ENST00000363592 107 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 AL033519.2-201ENST00000403958 392 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LRRTM3Q86VH5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.9
LRRTM3Q86VH5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM3Q86VH5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM3Q86VH5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM3Q86VH5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 MIR568-201ENST00000385036 95 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 MIR634-201ENST00000385208 97 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 AL445687.1-201ENST00000439946 251 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 AL161670.1-201ENST00000554348 137 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 AL355297.2-201ENST00000604792 129 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.15□□□□□ -1.91
LRRTM3Q86VH5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 Y_RNA.143-201ENST00000363520 106 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AC004866.1-201ENST00000411748 78 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 IPO7P1-201ENST00000442031 636 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AL135938.1-201ENST00000443141 297 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 RNU6-408P-201ENST00000515910 100 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 SNORA48.11-201ENST00000517015 89 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 AC233702.2-202ENST00000562547 291 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 MIR376A1-201ENST00000616574 68 ntBASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM3Q86VH5 LINC02555-201ENST00000563933 1951 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 RNU6-234P-201ENST00000365229 104 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 RNU6-546P-201ENST00000383991 107 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 Y_RNA.556-201ENST00000384677 113 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 AC003685.2-201ENST00000422795 395 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 RPL26P26-201ENST00000480251 434 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
LRRTM3Q86VH5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms