Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 AC079600.2-201ENST00000550076 130 ntBASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 AC020661.2-201ENST00000560114 134 ntBASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 SNRPGP17-201ENST00000603780 214 ntBASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 AC134503.1-201ENST00000633048 54 ntBASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.45□□□□□ -2.02
RUNDC3AQ59EK9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 Y_RNA.128-201ENST00000363391 112 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-234P-201ENST00000365229 104 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNY1P14-201ENST00000384426 108 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 MIR23A-201ENST00000385245 73 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 MIR548P-201ENST00000408336 84 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 EIF1P2-201ENST00000428233 350 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 SUMO1P4-201ENST00000429430 302 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC004386.2-201ENST00000441858 148 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AL135938.1-201ENST00000443141 297 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 ATP5EP1-201ENST00000510257 156 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-1198P-201ENST00000516904 67 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-667P-201ENST00000517186 102 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 MIR5695-201ENST00000579717 85 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC125232.2-201ENST00000592457 143 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC092447.9-201ENST00000603395 144 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 AC007485.1-201ENST00000616755 206 ntBASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RUNDC3AQ59EK9 RNU1-115P-201ENST00000365329 160 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 SNORA69.1-201ENST00000390904 137 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 AC096644.2-201ENST00000429278 159 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 AC096638.1-201ENST00000444678 216 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 RNU7-169P-201ENST00000459456 61 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 MIR4272-201ENST00000635924 64 ntBASIC2.43□□□□□ -2.02
RUNDC3AQ59EK9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-743P-201ENST00000364151 106 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-245P-201ENST00000384020 107 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 MIR9-1-201ENST00000385198 89 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 AC132942.1-201ENST00000486753 483 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNU4-77P-201ENST00000516692 156 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNU2-44P-201ENST00000516795 194 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 Y_RNA.711-201ENST00000516993 102 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 RN7SKP295-201ENST00000517264 153 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 AC034114.1-201ENST00000520293 285 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 LARP7P3-201ENST00000579888 337 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 MIR5006-201ENST00000583027 110 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 SNRPGP20-201ENST00000604477 205 ntBASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
RUNDC3AQ59EK9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 Y_RNA.148-201ENST00000363557 117 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-1227P-201ENST00000383981 107 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-281P-201ENST00000384212 103 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RNU6-1001P-201ENST00000411265 100 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 MCFD2P1-201ENST00000417812 300 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 MTND4P19-201ENST00000446659 478 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AC009237.7-201ENST00000447357 229 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AP001486.1-201ENST00000463339 476 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 SNORA4.4-201ENST00000515921 135 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 SNORA25.14-201ENST00000516481 132 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AC144568.1-201ENST00000520139 137 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 MIR3171-201ENST00000584270 74 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AL356055.1-201ENST00000602528 446 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RPL17P51-201ENST00000605218 238 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 AC006157.1-201ENST00000611750 366 ntBASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms