Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AC127455.1-201ENST00000565496 145 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AC106785.1-201ENST00000565935 262 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AL031274.2-201ENST00000599419 203 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 VN1R85P-201ENST00000601587 426 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AL359881.1-201ENST00000602916 267 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AC096577.2-201ENST00000611455 153 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 AC002064.3-201ENST00000623448 346 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 ZNF702P-202ENST00000434269 1966 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 RNA5SP388-201ENST00000362584 119 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 RNU4-13P-201ENST00000364019 141 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 RNY3P5-201ENST00000384127 102 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AL135786.1-201ENST00000415892 214 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AL353705.1-201ENST00000433468 480 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC080013.2-201ENST00000460866 323 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC008155.2-201ENST00000464337 397 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 RAC1P5-201ENST00000512182 576 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-965P-201ENST00000516721 96 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 SCARNA11.3-201ENST00000517276 130 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC006064.5-201ENST00000541782 248 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 MIR4644-201ENST00000579929 84 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AL354798.1-201ENST00000622505 329 ntBASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM259Q4ZIN3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 Y_RNA.71-201ENST00000362892 104 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-768P-201ENST00000384683 107 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RNU1-101P-201ENST00000391171 127 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 MIR1911-201ENST00000410783 80 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RPS12P18-201ENST00000442381 270 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RNA5SP246-201ENST00000458909 119 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-437P-201ENST00000459408 95 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RPL36AP21-201ENST00000490372 323 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-1333P-201ENST00000516162 93 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 MIR3646-201ENST00000578301 84 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 MIR6867-201ENST00000610636 67 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 AC011603.4-201ENST00000611325 277 ntBASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM259Q4ZIN3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 AP001486.2-201ENST00000561652 5113 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 SPRR2C-201ENST00000290702 219 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 RNA5SP139-201ENST00000364340 117 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 SNORA79-201ENST00000408376 140 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 DBIP2-201ENST00000419076 262 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 AC025647.1-201ENST00000517879 253 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 AL020997.2-201ENST00000602607 184 ntBASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM259Q4ZIN3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.73
TMEM259Q4ZIN3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM259Q4ZIN3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM259Q4ZIN3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM259Q4ZIN3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 MIR423-201ENST00000362201 94 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 Y_RNA.127-201ENST00000363386 109 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 Y_RNA.218-201ENST00000364218 104 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RNU4-41P-201ENST00000364426 143 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RNA5SP205-201ENST00000364653 136 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RNU6-1180P-201ENST00000364935 107 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 CD24P4-201ENST00000382840 243 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RNU6-136P-201ENST00000384663 107 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 Y_RNA.587-201ENST00000391210 103 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 SNORD66.1-201ENST00000391230 76 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 AL512604.1-201ENST00000404812 257 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 AC008134.1-201ENST00000420943 193 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 AC010154.1-201ENST00000425857 269 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RPL30P4-201ENST00000429309 333 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 RPL23AP58-201ENST00000440453 469 ntBASIC4.21□□□□□ -1.74
TMEM259Q4ZIN3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms