Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNY3P4-201ENST00000384428 101 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 BMS1P22-201ENST00000414726 313 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 AC009237.7-201ENST00000447357 229 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 AC112492.4-201ENST00000456549 352 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 RNU6-344P-201ENST00000516635 111 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 AP002770.2-201ENST00000543613 532 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 MIR4319-201ENST00000577285 85 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 MIR5188-201ENST00000583467 113 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 SNORD58B-201ENST00000607313 66 ntBASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC144BQ3MJ40 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 SNORA38-201ENST00000363946 132 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 SNORD14.1-201ENST00000365609 90 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 RNU6-793P-201ENST00000384233 104 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 MTCO3P8-201ENST00000453691 755 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 RN7SKP49-201ENST00000516675 260 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC144BQ3MJ40 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 RNU1-23P-201ENST00000363361 144 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 Y_RNA.132-201ENST00000363421 102 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 RNU6-851P-201ENST00000384565 107 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AL451074.5-201ENST00000415894 435 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC009238.1-201ENST00000442165 424 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC009237.6-201ENST00000446969 424 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 CHEK2P4-201ENST00000450340 246 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC108938.1-201ENST00000451204 136 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC107871.2-201ENST00000612894 502 ntBASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC144BQ3MJ40 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 RNU6-611P-201ENST00000384276 104 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AL357139.1-201ENST00000407792 426 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 Y_RNA.595-201ENST00000410403 105 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 U8.22-201ENST00000459141 133 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 Y_RNA.683-201ENST00000516508 93 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AC022616.4-201ENST00000522985 181 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 CBX3P7-201ENST00000532876 502 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AC040896.1-201ENST00000613819 479 ntBASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC144BQ3MJ40 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AC091812.1-201ENST00000432235 1948 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AL136360.1-201ENST00000503377 1900 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU6-1301P-201ENST00000362724 104 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU4-50P-201ENST00000364361 141 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU6-1026P-201ENST00000384465 108 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 MIR300-201ENST00000401138 83 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU6-101P-201ENST00000410323 104 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNA5SP184-201ENST00000411071 108 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AC007395.1-201ENST00000451333 677 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU7-26P-201ENST00000458980 63 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 RNU6-1098P-201ENST00000516772 96 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 ANP32BP3-201ENST00000559213 706 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 SNORD11B-201ENST00000607707 90 ntBASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC144BQ3MJ40 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 SNORA25B-201ENST00000365507 128 ntBASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 AC125232.2-201ENST00000592457 143 ntBASIC3.32□□□□□ -1.88
CCDC144BQ3MJ40 AC022432.1-201ENST00000595739 310 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms