Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ECM1Q16610 AC010332.2-201ENST00000613083 1904 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 RNU1-101P-201ENST00000391171 127 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 AL357075.1-201ENST00000404107 726 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 OOSP1P1-201ENST00000423265 274 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 AL358232.1-201ENST00000448030 501 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 U3.44-201ENST00000458938 192 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 CYCTP-201ENST00000504253 315 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 RN7SKP18-201ENST00000516005 275 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 RNU6-191P-201ENST00000516295 94 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 RNU6-971P-201ENST00000516920 106 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 SCARNA11.3-201ENST00000517276 130 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.96□□□□□ -1.78
ECM1Q16610 CYCSP26-201ENST00000534107 320 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.96□□□□□ -1.78
ECM1Q16610 AC005828.6-201ENST00000606610 232 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.96□□□□□ -1.78
ECM1Q16610 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ECM1Q16610 AC091152.2-201ENST00000591628 2569 ntBASIC3.96□□□□□ -1.78
ECM1Q16610 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ECM1Q16610 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ECM1Q16610 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ECM1Q16610 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ECM1Q16610 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ECM1Q16610 AC068647.1-201ENST00000489539 2265 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ECM1Q16610 SNORA63.4-201ENST00000362763 126 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 RNY4P18-201ENST00000391107 89 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 MIR1294-201ENST00000408503 142 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 AC002075.2-201ENST00000425207 252 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 YME1L1P1-201ENST00000429435 297 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.95□□□□□ -1.78
ECM1Q16610 AL137159.1-201ENST00000452808 512 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 RNU5F-4P-201ENST00000516581 114 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 AC026333.2-201ENST00000542164 106 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.95□□□□□ -1.78
ECM1Q16610 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.95□□□□□ -1.78
ECM1Q16610 AC090517.3-201ENST00000625170 141 ntBASIC3.95□□□□□ -1.78
ECM1Q16610 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.95□□□□□ -1.78
ECM1Q16610 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
ECM1Q16610 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ECM1Q16610 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ECM1Q16610 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ECM1Q16610 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.94□□□□□ -1.78
ECM1Q16610 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.94□□□□□ -1.78
ECM1Q16610 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.94□□□□□ -1.78
ECM1Q16610 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ECM1Q16610 RNU1-75P-201ENST00000347264 129 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 RNU4-80P-201ENST00000363200 141 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 RNU4-84P-201ENST00000364200 139 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 Y_RNA.217-201ENST00000364214 105 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 SNORA40-201ENST00000388090 126 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 MIR300-201ENST00000401138 83 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 AL139281.1-201ENST00000422120 335 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 MTND4LP9-201ENST00000427694 174 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.94□□□□□ -1.78
ECM1Q16610 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.94□□□□□ -1.78
ECM1Q16610 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
ECM1Q16610 RPS29P31-201ENST00000446147 164 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 Y_RNA.641-201ENST00000459414 105 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 SNORA70.12-201ENST00000516084 153 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 Y_RNA.686-201ENST00000516548 134 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 AC055872.1-201ENST00000570978 278 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 MIR3613-201ENST00000579844 87 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.94□□□□□ -1.78
ECM1Q16610 MIR6075-201ENST00000620782 95 ntBASIC3.94□□□□□ -1.78
ECM1Q16610 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ECM1Q16610 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.94□□□□□ -1.78
ECM1Q16610 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.94□□□□□ -1.78
ECM1Q16610 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ECM1Q16610 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ECM1Q16610 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ECM1Q16610 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ECM1Q16610 RNU6-312P-201ENST00000364629 107 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 U3.40-201ENST00000408706 208 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.93□□□□□ -1.78
ECM1Q16610 SNORD105B-201ENST00000458770 79 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AC025518.1-201ENST00000479856 347 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AC006445.1-201ENST00000491925 405 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.93□□□□□ -1.78
ECM1Q16610 RNU2-12P-201ENST00000517216 168 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.93□□□□□ -1.78
ECM1Q16610 AC092628.2-201ENST00000622492 339 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 MIR7157-201ENST00000635801 60 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ECM1Q16610 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
ECM1Q16610 MFSD8-233ENST00000641482 4860 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 AC058791.1-201ENST00000608412 3198 ntBASIC3.93□□□□□ -1.78
ECM1Q16610 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.93□□□□□ -1.78
ECM1Q16610 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
ECM1Q16610 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ECM1Q16610 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.92□□□□□ -1.78
ECM1Q16610 AC091564.4-201ENST00000533934 2194 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 RNU6-653P-201ENST00000363074 106 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms