Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL359697.1-201ENST00000624879 587 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 ZNF204P-201ENST00000416749 2397 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SCN1BQ07699 RNU6-112P-201ENST00000363599 104 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 U8.10-201ENST00000384260 133 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 AC009161.1-201ENST00000417306 376 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 Z82188.1-201ENST00000436709 154 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 NFU1P2-201ENST00000448700 469 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN1BQ07699 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN1BQ07699 AC124303.1-201ENST00000605703 360 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 AC013412.1-201ENST00000610687 192 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 MIR3662-201ENST00000637030 95 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 MTND4P5-201ENST00000435821 1374 ntBASIC1.79□□□□□ -2.12
SCN1BQ07699 MTND5P6-201ENST00000422338 1798 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 SNORD116-11-201ENST00000383882 92 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 Y_RNA.453-201ENST00000384223 109 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 Y_RNA.510-201ENST00000384511 114 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN1BQ07699 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN1BQ07699 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN1BQ07699 snoU13.30-201ENST00000458951 104 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 AC114982.1-201ENST00000469402 321 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 HMGN2P9-201ENST00000476875 229 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
SCN1BQ07699 AC067942.3-201ENST00000512025 362 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 Y_RNA.655-201ENST00000515919 96 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 RNU2-34P-201ENST00000516534 121 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.78□□□□□ -2.12
SCN1BQ07699 AC010928.2-201ENST00000588017 287 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 MIR3688-2-201ENST00000636963 87 ntBASIC1.78□□□□□ -2.12
SCN1BQ07699 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN1BQ07699 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.77□□□□□ -2.13
SCN1BQ07699 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU1-96P-201ENST00000364163 162 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU6-1305P-201ENST00000364353 104 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU4-9P-201ENST00000364951 139 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU6-296P-201ENST00000384608 107 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 MIR32-201ENST00000384965 70 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 MIR320B2-201ENST00000408479 138 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU6-1148P-201ENST00000410992 104 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 AC060773.1-201ENST00000421698 310 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN1BQ07699 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN1BQ07699 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 RNU6-864P-201ENST00000516256 108 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 SCARNA16.3-201ENST00000516595 184 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN1BQ07699 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 AC006504.8-201ENST00000621046 635 ntBASIC1.77□□□□□ -2.13
SCN1BQ07699 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN1BQ07699 BX322639.1-202ENST00000423987 2213 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
SCN1BQ07699 Y_RNA.157-201ENST00000363638 102 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 RNU6-831P-201ENST00000384548 107 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SCN1BQ07699 MIR548F1-201ENST00000408667 84 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 RN7SKP32-201ENST00000410167 303 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN1BQ07699 AC092989.1-201ENST00000481235 277 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 AC011406.1-201ENST00000512440 370 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN1BQ07699 RNU6-718P-201ENST00000516166 105 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 RNU1-117P-201ENST00000517041 158 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN1BQ07699 SNRPGP18-201ENST00000553000 214 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN1BQ07699 MIR3198-2-201ENST00000577868 80 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 AC090517.2-201ENST00000614966 680 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
SCN1BQ07699 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN1BQ07699 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SCN1BQ07699 RNU4-82P-201ENST00000362443 140 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNU6-975P-201ENST00000384296 105 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNU6-1235P-201ENST00000384559 107 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNA5SP118-201ENST00000410385 109 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNA5SP508-201ENST00000411327 119 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN1BQ07699 AC245047.4-201ENST00000433189 144 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.75□□□□□ -2.13
SCN1BQ07699 RNU6-498P-201ENST00000459468 107 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 FO393415.2-201ENST00000480085 343 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNU6-948P-201ENST00000516374 107 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 RNA5SP384-201ENST00000516615 116 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.75□□□□□ -2.13
SCN1BQ07699 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.75□□□□□ -2.13
SCN1BQ07699 AC126177.8-201ENST00000618339 1015 ntBASIC1.75□□□□□ -2.13
SCN1BQ07699 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SCN1BQ07699 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
SCN1BQ07699 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.74□□□□□ -2.13
SCN1BQ07699 MIR449A-201ENST00000362113 91 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 MIR586-201ENST00000385035 97 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms