Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC103705.1-201ENST00000619013 241 ntBASIC1.41□□□□□ -2.18
IRX3P78415 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.41□□□□□ -2.18
IRX3P78415 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.41□□□□□ -2.18
IRX3P78415 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
IRX3P78415 MIR597-201ENST00000384968 97 ntBASIC1.4□□□□□ -2.19
IRX3P78415 RNU6-1158P-201ENST00000391167 107 ntBASIC1.4□□□□□ -2.19
IRX3P78415 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.4□□□□□ -2.19
IRX3P78415 AC012306.1-201ENST00000423267 114 ntBASIC1.4□□□□□ -2.19
IRX3P78415 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.4□□□□□ -2.19
IRX3P78415 TOMM22P2-201ENST00000430735 237 ntBASIC1.4□□□□□ -2.19
IRX3P78415 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.4□□□□□ -2.19
IRX3P78415 FTH1P12-201ENST00000432137 551 ntBASIC1.4□□□□□ -2.19
IRX3P78415 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
IRX3P78415 U8.21-201ENST00000459536 136 ntBASIC1.4□□□□□ -2.19
IRX3P78415 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.4□□□□□ -2.19
IRX3P78415 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.4□□□□□ -2.19
IRX3P78415 Y_RNA.688-201ENST00000516565 95 ntBASIC1.4□□□□□ -2.19
IRX3P78415 SNORA31.16-201ENST00000516773 139 ntBASIC1.4□□□□□ -2.19
IRX3P78415 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
IRX3P78415 AC026407.1-201ENST00000518369 204 ntBASIC1.4□□□□□ -2.19
IRX3P78415 AL391646.1-201ENST00000603860 190 ntBASIC1.4□□□□□ -2.19
IRX3P78415 Z98751.3-201ENST00000604447 521 ntBASIC1.4□□□□□ -2.19
IRX3P78415 AC009994.1-201ENST00000606889 253 ntBASIC1.4□□□□□ -2.19
IRX3P78415 HULC.1-201ENST00000612720 240 ntBASIC1.4□□□□□ -2.19
IRX3P78415 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.4□□□□□ -2.19
IRX3P78415 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.4□□□□□ -2.19
IRX3P78415 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
IRX3P78415 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.39□□□□□ -2.19
IRX3P78415 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
IRX3P78415 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
IRX3P78415 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
IRX3P78415 RNU6-227P-201ENST00000362865 103 ntBASIC1.39□□□□□ -2.19
IRX3P78415 RNU1-76P-201ENST00000362903 159 ntBASIC1.39□□□□□ -2.19
IRX3P78415 EBAG9P1-201ENST00000418955 543 ntBASIC1.39□□□□□ -2.19
IRX3P78415 MTCYBP8-201ENST00000422855 651 ntBASIC1.39□□□□□ -2.19
IRX3P78415 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.39□□□□□ -2.19
IRX3P78415 AC083798.1-201ENST00000472671 131 ntBASIC1.39□□□□□ -2.19
IRX3P78415 OR2A41P-201ENST00000473586 105 ntBASIC1.39□□□□□ -2.19
IRX3P78415 RPS23P5-201ENST00000495419 428 ntBASIC1.39□□□□□ -2.19
IRX3P78415 AC010424.1-201ENST00000506336 297 ntBASIC1.39□□□□□ -2.19
IRX3P78415 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.39□□□□□ -2.19
IRX3P78415 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.39□□□□□ -2.19
IRX3P78415 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.39□□□□□ -2.19
IRX3P78415 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.39□□□□□ -2.19
IRX3P78415 SUB1P4-201ENST00000566062 339 ntBASIC1.39□□□□□ -2.19
IRX3P78415 AC078795.3-201ENST00000602913 472 ntBASIC1.39□□□□□ -2.19
IRX3P78415 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
IRX3P78415 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.39□□□□□ -2.19
IRX3P78415 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.39□□□□□ -2.19
IRX3P78415 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.39□□□□□ -2.19
IRX3P78415 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
IRX3P78415 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.38□□□□□ -2.19
IRX3P78415 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
IRX3P78415 RNU6-562P-201ENST00000362731 107 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORD116-9-201ENST00000384000 95 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORA32.2-201ENST00000384049 122 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORD116-3-201ENST00000384287 95 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORD116-7-201ENST00000384404 95 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SNORD116-5-201ENST00000384462 95 ntBASIC1.38□□□□□ -2.19
IRX3P78415 Y_RNA.504-201ENST00000384481 104 ntBASIC1.38□□□□□ -2.19
IRX3P78415 MIR520E-201ENST00000384867 87 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AF228730.1-201ENST00000397972 663 ntBASIC1.38□□□□□ -2.19
IRX3P78415 MIR300-201ENST00000401138 83 ntBASIC1.38□□□□□ -2.19
IRX3P78415 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
IRX3P78415 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
IRX3P78415 RPS26P42-201ENST00000413485 326 ntBASIC1.38□□□□□ -2.19
IRX3P78415 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.38□□□□□ -2.19
IRX3P78415 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.38□□□□□ -2.19
IRX3P78415 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.38□□□□□ -2.19
IRX3P78415 RNU2-34P-201ENST00000516534 121 ntBASIC1.38□□□□□ -2.19
IRX3P78415 RNU5F-4P-201ENST00000516581 114 ntBASIC1.38□□□□□ -2.19
IRX3P78415 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
IRX3P78415 SUMO2P18-201ENST00000518873 252 ntBASIC1.38□□□□□ -2.19
IRX3P78415 CENPUP1-201ENST00000526649 1202 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.38□□□□□ -2.19
IRX3P78415 AC019288.1-201ENST00000557918 224 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AC026470.2-201ENST00000561492 181 ntBASIC1.38□□□□□ -2.19
IRX3P78415 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AL355802.3-201ENST00000607571 545 ntBASIC1.38□□□□□ -2.19
IRX3P78415 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AC009509.4-201ENST00000619202 509 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AC137590.2-201ENST00000619709 240 ntBASIC1.38□□□□□ -2.19
IRX3P78415 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
IRX3P78415 AL450472.1-202ENST00000637286 180 ntBASIC1.38□□□□□ -2.19
IRX3P78415 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
IRX3P78415 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
IRX3P78415 RNU6-1026P-201ENST00000384465 108 ntBASIC1.37□□□□□ -2.19
IRX3P78415 RNA5SP219-201ENST00000390940 113 ntBASIC1.37□□□□□ -2.19
IRX3P78415 SNORA12-201ENST00000391162 147 ntBASIC1.37□□□□□ -2.19
IRX3P78415 RNU4-55P-201ENST00000410731 137 ntBASIC1.37□□□□□ -2.19
IRX3P78415 MRPL35P3-201ENST00000421557 364 ntBASIC1.37□□□□□ -2.19
IRX3P78415 MTCO1P44-201ENST00000441935 243 ntBASIC1.37□□□□□ -2.19
IRX3P78415 TPTE2P5-203ENST00000458118 728 ntBASIC1.37□□□□□ -2.19
IRX3P78415 AC016925.1-201ENST00000458303 298 ntBASIC1.37□□□□□ -2.19
IRX3P78415 RPS29P1-201ENST00000465274 159 ntBASIC1.37□□□□□ -2.19
IRX3P78415 AC079140.3-201ENST00000511111 550 ntBASIC1.37□□□□□ -2.19
IRX3P78415 RNU6-1069P-201ENST00000516612 133 ntBASIC1.37□□□□□ -2.19
IRX3P78415 AC005668.1-201ENST00000571142 476 ntBASIC1.37□□□□□ -2.19
IRX3P78415 AP005136.1-201ENST00000579765 429 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms