Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SNORA12.1-201ENST00000390873 148 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 RNU6-1242P-201ENST00000391052 103 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 MIR1253-201ENST00000408273 105 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 Y_RNA.608-201ENST00000410647 95 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.36□□□□□ -2.35
SPCS3P61009 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.36□□□□□ -2.35
SPCS3P61009 AC090049.2-201ENST00000550377 109 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.36□□□□□ -2.35
SPCS3P61009 AC146944.4-201ENST00000602697 718 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.36□□□□□ -2.35
SPCS3P61009 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
SPCS3P61009 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 AC138649.3-201ENST00000622154 254 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 U6.108-201ENST00000637764 58 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 U3.8-201ENST00000363675 217 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 RNU6-660P-201ENST00000364566 109 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AL034345.1-201ENST00000407768 123 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.35□□□□□ -2.35
SPCS3P61009 AC079382.1-201ENST00000493346 557 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AK3P2-201ENST00000507976 429 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.35□□□□□ -2.35
SPCS3P61009 RNU6-1178P-201ENST00000516674 107 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 RNU1-142P-201ENST00000516682 145 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AC022616.3-201ENST00000523940 148 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SPCS3P61009 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.35□□□□□ -2.35
SPCS3P61009 AC073349.3-201ENST00000617616 186 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AC005562.2-201ENST00000618264 111 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AL607023.1-201ENST00000620045 248 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 AL031667.3-201ENST00000620124 655 ntBASIC0.35□□□□□ -2.35
SPCS3P61009 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SPCS3P61009 RNU6-636P-201ENST00000384598 107 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SPCS3P61009 RNU6-440P-201ENST00000390882 105 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 RNU6-550P-201ENST00000391057 101 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 AL355796.1-201ENST00000406706 323 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.34□□□□□ -2.36
SPCS3P61009 RPL39P39-201ENST00000455840 151 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.34□□□□□ -2.36
SPCS3P61009 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.34□□□□□ -2.36
SPCS3P61009 AC103996.1-201ENST00000555468 102 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 MIR4781-201ENST00000585250 76 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 PRELID3BP2-201ENST00000605362 201 ntBASIC0.34□□□□□ -2.36
SPCS3P61009 MTND4P5-201ENST00000435821 1374 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 RNU6-199P-201ENST00000362954 107 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 RNU6-827P-201ENST00000365553 106 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 SNORD116-13-201ENST00000384408 92 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 SNORA75.2-201ENST00000391138 150 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 SNORA75.3-201ENST00000391231 150 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.33□□□□□ -2.36
SPCS3P61009 AL606662.1-201ENST00000445763 553 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 EXOSC3P1-201ENST00000448649 500 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 NFU1P2-201ENST00000448700 469 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 AL031274.1-201ENST00000450334 232 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.33□□□□□ -2.36
SPCS3P61009 AL049830.1-201ENST00000468034 425 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.33□□□□□ -2.36
SPCS3P61009 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.33□□□□□ -2.36
SPCS3P61009 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.33□□□□□ -2.36
SPCS3P61009 FAM106DP-201ENST00000586416 501 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 AL357312.1-201ENST00000603879 298 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 AL359075.3-201ENST00000613288 217 ntBASIC0.33□□□□□ -2.36
SPCS3P61009 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.33□□□□□ -2.36
SPCS3P61009 MTND5P17-201ENST00000418405 1603 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 RNA5SP347-201ENST00000362445 119 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 RNU4-48P-201ENST00000365559 182 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 MRPL42P3-201ENST00000401492 326 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AL451046.2-201ENST00000403074 277 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AL356583.2-201ENST00000426536 280 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AC245047.3-201ENST00000429428 127 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AC004386.2-201ENST00000441858 148 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 SNRPFP3-201ENST00000457792 225 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 MTCO2P6-201ENST00000463134 685 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.32□□□□□ -2.36
SPCS3P61009 SCARNA24.1-201ENST00000516465 137 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 RNU6-467P-201ENST00000517027 110 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AC026470.2-201ENST00000561492 181 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 MIR5006-201ENST00000583027 110 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.32□□□□□ -2.36
SPCS3P61009 AC004808.1-201ENST00000627671 721 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
SPCS3P61009 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.32□□□□□ -2.36
SPCS3P61009 OR4G1P-203ENST00000641984 1631 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 RNY1P12-201ENST00000364251 105 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC016909.1-201ENST00000415916 166 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.31□□□□□ -2.36
SPCS3P61009 AL031313.1-201ENST00000448435 256 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC074290.1-201ENST00000448883 135 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 RNU6-1053P-201ENST00000515930 101 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 SNORA70.12-201ENST00000516084 153 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 RNU6-1220P-201ENST00000517126 108 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.31□□□□□ -2.36
SPCS3P61009 AC004584.2-201ENST00000570407 410 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms