Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.51□□□□□ -2.01
SOX2P48431 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.51□□□□□ -2.01
SOX2P48431 TCL6_2.1-201ENST00000615162 119 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SOX2P48431 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.51□□□□□ -2.01
SOX2P48431 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
SOX2P48431 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SOX2P48431 MTND5P35-201ENST00000557537 1720 ntBASIC2.51□□□□□ -2.01
SOX2P48431 RNU1-72P-201ENST00000362976 153 ntBASIC2.5□□□□□ -2.01
SOX2P48431 Y_RNA.143-201ENST00000363520 106 ntBASIC2.5□□□□□ -2.01
SOX2P48431 Y_RNA.222-201ENST00000364264 102 ntBASIC2.5□□□□□ -2.01
SOX2P48431 RNU6-806P-201ENST00000365147 105 ntBASIC2.5□□□□□ -2.01
SOX2P48431 SNORA9.2-201ENST00000365361 133 ntBASIC2.5□□□□□ -2.01
SOX2P48431 SNORA18.2-201ENST00000383865 132 ntBASIC2.5□□□□□ -2.01
SOX2P48431 Y_RNA.401-201ENST00000383965 117 ntBASIC2.5□□□□□ -2.01
SOX2P48431 SNORA12-201ENST00000391162 147 ntBASIC2.5□□□□□ -2.01
SOX2P48431 Y_RNA.597-201ENST00000410463 100 ntBASIC2.5□□□□□ -2.01
SOX2P48431 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.5□□□□□ -2.01
SOX2P48431 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
SOX2P48431 AC004386.2-201ENST00000441858 148 ntBASIC2.5□□□□□ -2.01
SOX2P48431 PCNPP5-201ENST00000452246 481 ntBASIC2.5□□□□□ -2.01
SOX2P48431 LINC01399-202ENST00000458450 244 ntBASIC2.5□□□□□ -2.01
SOX2P48431 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
SOX2P48431 AC023141.11-201ENST00000508864 202 ntBASIC2.5□□□□□ -2.01
SOX2P48431 SNORA40.9-201ENST00000515895 93 ntBASIC2.5□□□□□ -2.01
SOX2P48431 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.5□□□□□ -2.01
SOX2P48431 AL713866.2-201ENST00000603579 219 ntBASIC2.5□□□□□ -2.01
SOX2P48431 MIR7112-201ENST00000616126 65 ntBASIC2.5□□□□□ -2.01
SOX2P48431 MIR376A1-201ENST00000616574 68 ntBASIC2.5□□□□□ -2.01
SOX2P48431 U6.104-201ENST00000637979 90 ntBASIC2.5□□□□□ -2.01
SOX2P48431 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SOX2P48431 AC000403.1-201ENST00000613696 3585 ntBASIC2.5□□□□□ -2.01
SOX2P48431 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
SOX2P48431 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
SOX2P48431 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SOX2P48431 LINC02555-201ENST00000563933 1951 ntBASIC2.49□□□□□ -2.01
SOX2P48431 Y_RNA.26-201ENST00000362539 101 ntBASIC2.49□□□□□ -2.01
SOX2P48431 Y_RNA.193-201ENST00000363979 102 ntBASIC2.49□□□□□ -2.01
SOX2P48431 SNORA71.1-201ENST00000364523 117 ntBASIC2.49□□□□□ -2.01
SOX2P48431 MIR670-201ENST00000390142 98 ntBASIC2.49□□□□□ -2.01
SOX2P48431 MIR1302-6-201ENST00000408466 90 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.49□□□□□ -2.01
SOX2P48431 UQCRBP2-201ENST00000447827 297 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.49□□□□□ -2.01
SOX2P48431 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.49□□□□□ -2.01
SOX2P48431 AC080013.2-201ENST00000460866 323 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AC091179.3-201ENST00000474761 144 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AC025465.3-201ENST00000510570 311 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AC008885.1-201ENST00000514930 301 ntBASIC2.49□□□□□ -2.01
SOX2P48431 RNU2-44P-201ENST00000516795 194 ntBASIC2.49□□□□□ -2.01
SOX2P48431 RNU6-586P-201ENST00000517265 104 ntBASIC2.49□□□□□ -2.01
SOX2P48431 AP003733.2-201ENST00000529409 171 ntBASIC2.49□□□□□ -2.01
SOX2P48431 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.49□□□□□ -2.01
SOX2P48431 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.49□□□□□ -2.01
SOX2P48431 MIR4429-201ENST00000580105 73 ntBASIC2.49□□□□□ -2.01
SOX2P48431 MIR5006-201ENST00000583027 110 ntBASIC2.49□□□□□ -2.01
SOX2P48431 MZT1P2-201ENST00000604387 248 ntBASIC2.49□□□□□ -2.01
SOX2P48431 RPL17P51-201ENST00000605218 238 ntBASIC2.49□□□□□ -2.01
SOX2P48431 MIR6075-201ENST00000620782 95 ntBASIC2.49□□□□□ -2.01
SOX2P48431 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SOX2P48431 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SOX2P48431 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SOX2P48431 AC092593.1-201ENST00000515413 1815 ntBASIC2.49□□□□□ -2.01
SOX2P48431 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SOX2P48431 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SOX2P48431 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.48□□□□□ -2.01
SOX2P48431 SNORD32B-201ENST00000364460 84 ntBASIC2.48□□□□□ -2.01
SOX2P48431 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SOX2P48431 Y_RNA.461-201ENST00000384263 103 ntBASIC2.48□□□□□ -2.01
SOX2P48431 RNU6-1274P-201ENST00000384557 107 ntBASIC2.48□□□□□ -2.01
SOX2P48431 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.48□□□□□ -2.01
SOX2P48431 AC022018.1-201ENST00000430685 241 ntBASIC2.48□□□□□ -2.01
SOX2P48431 IFNA11P-201ENST00000446352 526 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AC009237.7-201ENST00000447357 229 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AC003982.1-202ENST00000469928 248 ntBASIC2.48□□□□□ -2.01
SOX2P48431 RN7SL297P-201ENST00000483161 293 ntBASIC2.48□□□□□ -2.01
SOX2P48431 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AC074133.1-201ENST00000515696 183 ntBASIC2.48□□□□□ -2.01
SOX2P48431 RNU6-408P-201ENST00000515910 100 ntBASIC2.48□□□□□ -2.01
SOX2P48431 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
SOX2P48431 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.48□□□□□ -2.01
SOX2P48431 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.48□□□□□ -2.01
SOX2P48431 AC136932.1-201ENST00000574771 208 ntBASIC2.48□□□□□ -2.01
SOX2P48431 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AC012314.7-201ENST00000619693 93 ntBASIC2.48□□□□□ -2.01
SOX2P48431 MIR5739-201ENST00000619803 80 ntBASIC2.48□□□□□ -2.01
SOX2P48431 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.48□□□□□ -2.01
SOX2P48431 AL035425.3-201ENST00000564206 4996 ntBASIC2.48□□□□□ -2.01
SOX2P48431 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SOX2P48431 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SOX2P48431 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.47□□□□□ -2.01
SOX2P48431 SNORA71.3-201ENST00000362582 128 ntBASIC2.47□□□□□ -2.01
SOX2P48431 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
SOX2P48431 Y_RNA.105-201ENST00000363182 111 ntBASIC2.47□□□□□ -2.01
SOX2P48431 RNU6-727P-201ENST00000363592 107 ntBASIC2.47□□□□□ -2.01
SOX2P48431 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
SOX2P48431 SNORD115-46-201ENST00000390982 71 ntBASIC2.47□□□□□ -2.01
SOX2P48431 AL033519.2-201ENST00000403958 392 ntBASIC2.47□□□□□ -2.01
SOX2P48431 MIR1294-201ENST00000408503 142 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms