Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SNORA11.2-201ENST00000408318 127 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.32□□□□□ -2.2
SSR1P43307 RPS6P15-201ENST00000431996 751 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.32□□□□□ -2.2
SSR1P43307 JTBP1-201ENST00000441314 247 ntBASIC1.32□□□□□ -2.2
SSR1P43307 MTCO2P3-201ENST00000442543 421 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AC009474.2-201ENST00000451383 136 ntBASIC1.32□□□□□ -2.2
SSR1P43307 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.32□□□□□ -2.2
SSR1P43307 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.32□□□□□ -2.2
SSR1P43307 AL356157.2-201ENST00000605122 111 ntBASIC1.32□□□□□ -2.2
SSR1P43307 AC005520.5-201ENST00000613926 164 ntBASIC1.32□□□□□ -2.2
SSR1P43307 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SSR1P43307 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SSR1P43307 Y_RNA.1-201ENST00000352915 104 ntBASIC1.31□□□□□ -2.2
SSR1P43307 RNA5SP99-201ENST00000364020 114 ntBASIC1.31□□□□□ -2.2
SSR1P43307 MIR450B-201ENST00000401182 78 ntBASIC1.31□□□□□ -2.2
SSR1P43307 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
SSR1P43307 ARL5AP1-201ENST00000418991 388 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.31□□□□□ -2.2
SSR1P43307 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.31□□□□□ -2.2
SSR1P43307 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.31□□□□□ -2.2
SSR1P43307 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
SSR1P43307 OR2AQ1P-201ENST00000451972 200 ntBASIC1.31□□□□□ -2.2
SSR1P43307 MTCO3P8-201ENST00000453691 755 ntBASIC1.31□□□□□ -2.2
SSR1P43307 TPT1P7-201ENST00000458300 517 ntBASIC1.31□□□□□ -2.2
SSR1P43307 snoU13.23-201ENST00000458863 104 ntBASIC1.31□□□□□ -2.2
SSR1P43307 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
SSR1P43307 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
SSR1P43307 CENPUP1-201ENST00000526649 1202 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AC006362.1-201ENST00000567392 174 ntBASIC1.31□□□□□ -2.2
SSR1P43307 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
SSR1P43307 MIR5006-201ENST00000583027 110 ntBASIC1.31□□□□□ -2.2
SSR1P43307 NIFKP6-201ENST00000598115 845 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AP003465.2-201ENST00000602571 373 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AL357078.3-201ENST00000607528 618 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.31□□□□□ -2.2
SSR1P43307 Z69908.1-201ENST00000622603 247 ntBASIC1.31□□□□□ -2.2
SSR1P43307 AC005858.4-201ENST00000623191 700 ntBASIC1.31□□□□□ -2.2
SSR1P43307 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
SSR1P43307 Y_RNA.255-201ENST00000364581 97 ntBASIC1.3□□□□□ -2.2
SSR1P43307 Y_RNA.296-201ENST00000364930 108 ntBASIC1.3□□□□□ -2.2
SSR1P43307 RNU4-66P-201ENST00000365199 138 ntBASIC1.3□□□□□ -2.2
SSR1P43307 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
SSR1P43307 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.3□□□□□ -2.2
SSR1P43307 MIR1283-1-201ENST00000408494 87 ntBASIC1.3□□□□□ -2.2
SSR1P43307 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.3□□□□□ -2.2
SSR1P43307 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.3□□□□□ -2.2
SSR1P43307 RPS3AP17-201ENST00000472594 777 ntBASIC1.3□□□□□ -2.2
SSR1P43307 RNA5SP401-201ENST00000515920 127 ntBASIC1.3□□□□□ -2.2
SSR1P43307 RNU6-189P-201ENST00000516120 101 ntBASIC1.3□□□□□ -2.2
SSR1P43307 RNU6-567P-201ENST00000516746 107 ntBASIC1.3□□□□□ -2.2
SSR1P43307 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.3□□□□□ -2.2
SSR1P43307 AC007834.2-201ENST00000536310 343 ntBASIC1.3□□□□□ -2.2
SSR1P43307 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.3□□□□□ -2.2
SSR1P43307 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.3□□□□□ -2.2
SSR1P43307 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.3□□□□□ -2.2
SSR1P43307 AC064807.4-201ENST00000607201 407 ntBASIC1.3□□□□□ -2.2
SSR1P43307 AC006001.4-201ENST00000622243 395 ntBASIC1.3□□□□□ -2.2
SSR1P43307 AP000770.2-201ENST00000623694 100 ntBASIC1.3□□□□□ -2.2
SSR1P43307 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SSR1P43307 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SSR1P43307 AC233981.2-201ENST00000611524 1614 ntBASIC1.29□□□□□ -2.2
SSR1P43307 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SSR1P43307 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SSR1P43307 RNU6-227P-201ENST00000362865 103 ntBASIC1.29□□□□□ -2.2
SSR1P43307 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
SSR1P43307 SNORA70.7-201ENST00000384159 133 ntBASIC1.29□□□□□ -2.2
SSR1P43307 RNA5SP494-201ENST00000410653 129 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AC092447.3-201ENST00000426027 686 ntBASIC1.29□□□□□ -2.2
SSR1P43307 TIMM9P3-201ENST00000428659 274 ntBASIC1.29□□□□□ -2.2
SSR1P43307 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.29□□□□□ -2.2
SSR1P43307 MTCO2P18-201ENST00000457151 658 ntBASIC1.29□□□□□ -2.2
SSR1P43307 RNU6-856P-201ENST00000516959 98 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.29□□□□□ -2.2
SSR1P43307 OSBPL9P5-201ENST00000542581 171 ntBASIC1.29□□□□□ -2.2
SSR1P43307 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.29□□□□□ -2.2
SSR1P43307 MIR5692C1-201ENST00000585309 91 ntBASIC1.29□□□□□ -2.2
SSR1P43307 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AC109347.2-201ENST00000610220 349 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
SSR1P43307 AC005562.2-201ENST00000618264 111 ntBASIC1.29□□□□□ -2.2
SSR1P43307 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
SSR1P43307 FER-210ENST00000628534 558 ntTSL 5 BASIC1.29□□□□□ -2.2
SSR1P43307 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.28□□□□□ -2.2
SSR1P43307 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
SSR1P43307 SNORA63D-201ENST00000364359 132 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU6-38P-201ENST00000384085 107 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU5A-6P-201ENST00000384136 116 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AL356776.1-201ENST00000406574 447 ntBASIC1.28□□□□□ -2.2
SSR1P43307 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.28□□□□□ -2.2
SSR1P43307 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
SSR1P43307 USP9YP14-201ENST00000430663 563 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AL445305.1-201ENST00000432577 575 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms