Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-480P-201ENST00000384332 107 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 AL592310.1-201ENST00000414330 671 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 MTCO1P20-201ENST00000425366 358 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.25□□□□□ -2.61
CPS1P31327 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.25□□□□□ -2.61
CPS1P31327 SNRPEP8-201ENST00000442866 260 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 LINC01399-202ENST00000458450 244 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.25□□□□□ -2.61
CPS1P31327 MTCO3P28-201ENST00000513351 515 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-927P-201ENST00000516199 100 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.25□□□□□ -2.61
CPS1P31327 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
CPS1P31327 RNU6-57P-201ENST00000411348 103 ntBASIC-1.26□□□□□ -2.61
CPS1P31327 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.26□□□□□ -2.61
CPS1P31327 AC093019.1-201ENST00000443135 252 ntBASIC-1.26□□□□□ -2.61
CPS1P31327 FABP5P15-201ENST00000453566 214 ntBASIC-1.26□□□□□ -2.61
CPS1P31327 MIR4782-201ENST00000577987 79 ntBASIC-1.26□□□□□ -2.61
CPS1P31327 AL158211.4-201ENST00000606988 584 ntBASIC-1.26□□□□□ -2.61
CPS1P31327 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.27□□□□□ -2.61
CPS1P31327 MRPS10P2-201ENST00000431226 381 ntBASIC-1.27□□□□□ -2.61
CPS1P31327 AC048346.1-201ENST00000510247 144 ntBASIC-1.27□□□□□ -2.61
CPS1P31327 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.27□□□□□ -2.61
CPS1P31327 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.27□□□□□ -2.61
CPS1P31327 MIR548AO-201ENST00000579992 96 ntBASIC-1.27□□□□□ -2.61
CPS1P31327 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.27□□□□□ -2.61
CPS1P31327 AC234772.3-201ENST00000602277 528 ntBASIC-1.27□□□□□ -2.61
CPS1P31327 SPINT5P-201ENST00000448174 155 ntBASIC-1.28□□□□□ -2.61
CPS1P31327 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.28□□□□□ -2.61
CPS1P31327 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.28□□□□□ -2.61
CPS1P31327 BCRP9-201ENST00000605312 388 ntBASIC-1.28□□□□□ -2.61
CPS1P31327 AL096861.1-201ENST00000610899 123 ntBASIC-1.28□□□□□ -2.61
CPS1P31327 AL118556.2-201ENST00000614375 824 ntBASIC-1.28□□□□□ -2.61
CPS1P31327 AL603839.4-201ENST00000624658 1005 ntBASIC-1.28□□□□□ -2.61
CPS1P31327 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.28□□□□□ -2.61
CPS1P31327 RNU6-543P-201ENST00000362576 108 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 AL049545.1-201ENST00000401856 572 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 RNU2-23P-201ENST00000410545 195 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 BTF3P15-201ENST00000455606 336 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 MTND2P7-201ENST00000521337 640 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 MIR4263-201ENST00000584745 83 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 SUMO2P14-201ENST00000604488 293 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 AL161798.1-201ENST00000604630 131 ntBASIC-1.29□□□□□ -2.62
CPS1P31327 RNU6-487P-201ENST00000365430 104 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-843P-201ENST00000384454 104 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 MTCO3P41-201ENST00000414801 328 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AL353997.1-201ENST00000432936 108 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 TPT1P7-201ENST00000458300 517 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.3□□□□□ -2.62
CPS1P31327 AC109445.1-201ENST00000512356 383 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU7-129P-201ENST00000516128 62 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU4-18P-201ENST00000516751 149 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
CPS1P31327 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1.3□□□□□ -2.62
CPS1P31327 AP003716.2-201ENST00000528260 108 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.3□□□□□ -2.62
CPS1P31327 AC006504.8-201ENST00000621046 635 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AL513423.1-201ENST00000621695 132 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AL162726.3-218ENST00000636401 95 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-199P-201ENST00000362954 107 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 SNORA25.7-201ENST00000364375 127 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 SNORA72.2-201ENST00000365028 127 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 MIR520G-201ENST00000385064 90 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 MIR520H-201ENST00000385126 88 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 MIR196A1-201ENST00000388006 70 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNA5SP163-201ENST00000410304 99 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-180P-201ENST00000516697 61 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC091163.3-201ENST00000518269 1144 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-1.3□□□□□ -2.62
CPS1P31327 AC022616.3-201ENST00000523940 148 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AL390208.1-201ENST00000605885 644 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC242628.1-201ENST00000606810 391 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.3□□□□□ -2.62
CPS1P31327 MIR3529-201ENST00000637713 78 ntBASIC-1.3□□□□□ -2.62
CPS1P31327 RNU6-161P-201ENST00000363051 106 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 SNORA12.1-201ENST00000390873 148 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.31□□□□□ -2.62
CPS1P31327 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.31□□□□□ -2.62
CPS1P31327 AC005042.3-201ENST00000453230 174 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 AC013828.2-201ENST00000532487 235 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 AC093519.1-201ENST00000566109 298 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 MIR3165-201ENST00000579874 75 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 uc_338.28-201ENST00000612082 187 ntBASIC-1.31□□□□□ -2.62
CPS1P31327 RNU6-1339P-201ENST00000363574 91 ntBASIC-1.32□□□□□ -2.62
CPS1P31327 SNORA2.2-201ENST00000365473 135 ntBASIC-1.32□□□□□ -2.62
CPS1P31327 SNORD83B-201ENST00000386745 93 ntBASIC-1.32□□□□□ -2.62
CPS1P31327 TPMTP2-201ENST00000414372 726 ntBASIC-1.32□□□□□ -2.62
CPS1P31327 MIR4432-201ENST00000581823 84 ntBASIC-1.32□□□□□ -2.62
CPS1P31327 AC083799.1-201ENST00000366451 910 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.33□□□□□ -2.62
CPS1P31327 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.33□□□□□ -2.62
CPS1P31327 AL133217.1-201ENST00000450980 425 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 SCARNA18-201ENST00000459004 134 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 MTND2P33-201ENST00000506452 1031 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 RNU6-917P-201ENST00000516294 104 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms