Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL606662.1-201ENST00000445763 553 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-498P-201ENST00000459468 107 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 MTCO2P6-201ENST00000463134 685 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 COX6CP6-201ENST00000490840 228 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-948P-201ENST00000516374 107 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.57□□□□□ -2.32
CD40LGP29965 MTND4P33-201ENST00000556706 766 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AP001836.1-201ENST00000604675 523 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 GHRLOS.1-201ENST00000610995 70 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.57□□□□□ -2.32
CD40LGP29965 AC018630.2-201ENST00000534866 2403 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 SNORA80D-201ENST00000384488 135 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 RNU6-417P-201ENST00000384712 107 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 RNA5SP467-201ENST00000391274 118 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.56□□□□□ -2.32
CD40LGP29965 AC090960.1-201ENST00000421072 306 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AL606517.2-201ENST00000442855 241 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AL009048.1-201ENST00000450437 298 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AL162395.1-201ENST00000457882 422 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 SRRM1P2-201ENST00000464531 1192 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AC105758.1-201ENST00000506038 399 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 RNA5SP220-201ENST00000516298 104 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 SNORA31.10-201ENST00000516482 106 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AC090572.1-201ENST00000519251 160 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.56□□□□□ -2.32
CD40LGP29965 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.56□□□□□ -2.32
CD40LGP29965 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.56□□□□□ -2.32
CD40LGP29965 MIR4753-201ENST00000585119 83 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AC112191.3-201ENST00000604371 277 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.56□□□□□ -2.32
CD40LGP29965 AL359697.1-201ENST00000624879 587 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 SNORD3E-202ENST00000627253 216 ntBASIC0.56□□□□□ -2.32
CD40LGP29965 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CD40LGP29965 MIR96-201ENST00000362288 78 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 Y_RNA.287-201ENST00000364853 94 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 RNU6-969P-201ENST00000383900 105 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 MIR520E-201ENST00000384867 87 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AL356583.2-201ENST00000426536 280 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.55□□□□□ -2.32
CD40LGP29965 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.55□□□□□ -2.32
CD40LGP29965 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.55□□□□□ -2.32
CD40LGP29965 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.55□□□□□ -2.32
CD40LGP29965 AC010486.2-201ENST00000505572 483 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 RNU6-922P-201ENST00000516753 99 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AC022878.1-201ENST00000530684 149 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.55□□□□□ -2.32
CD40LGP29965 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.55□□□□□ -2.32
CD40LGP29965 AC104458.1-201ENST00000608243 463 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AC091304.9-201ENST00000612091 226 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AL133173.2-201ENST00000614270 90 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 AC006927.3-201ENST00000638789 384 ntBASIC0.55□□□□□ -2.32
CD40LGP29965 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CD40LGP29965 RNU5E-5P-201ENST00000365379 116 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 Y_RNA.367-201ENST00000365544 101 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 RNU6-505P-201ENST00000384427 107 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 AL008987.1-201ENST00000415528 237 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 TIMM9P3-201ENST00000428659 274 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 USP9YP12-201ENST00000450481 570 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.54□□□□□ -2.32
CD40LGP29965 RNU6-1069P-201ENST00000516612 133 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 RNU2-46P-201ENST00000517038 113 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 SNORA25.17-201ENST00000517184 124 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 APOOP3-201ENST00000536787 586 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.54□□□□□ -2.32
CD40LGP29965 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
CD40LGP29965 AC006001.4-201ENST00000622243 395 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 AC022418.1-201ENST00000624118 445 ntBASIC0.54□□□□□ -2.32
CD40LGP29965 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.54□□□□□ -2.32
CD40LGP29965 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CD40LGP29965 RNU6-975P-201ENST00000384296 105 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 RN7SKP200-201ENST00000410564 320 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.53□□□□□ -2.32
CD40LGP29965 MTCO2P23-201ENST00000425216 680 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.53□□□□□ -2.32
CD40LGP29965 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.53□□□□□ -2.32
CD40LGP29965 RPS29P1-201ENST00000465274 159 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.53□□□□□ -2.32
CD40LGP29965 MIR151B-201ENST00000584249 96 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AL390123.1-201ENST00000603216 237 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 MIR6788-201ENST00000618842 66 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 AC106754.2-201ENST00000623006 233 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.53□□□□□ -2.32
CD40LGP29965 AC007671.2-201ENST00000637344 619 ntBASIC0.53□□□□□ -2.32
CD40LGP29965 MIR373-201ENST00000362273 69 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 RNU6-393P-201ENST00000384475 107 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 MIR549A-201ENST00000385268 96 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 RNA5SP323-201ENST00000391094 133 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms