Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SEM1P1-201ENST00000506694 209 ntBASIC4.15□□□□□ -1.75
RFX1P22670 HMGB3P3-201ENST00000510526 400 ntBASIC4.15□□□□□ -1.75
RFX1P22670 RNU6-1278P-201ENST00000516130 107 ntBASIC4.15□□□□□ -1.75
RFX1P22670 AC136628.3-201ENST00000521868 290 ntBASIC4.15□□□□□ -1.75
RFX1P22670 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.15□□□□□ -1.75
RFX1P22670 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX1P22670 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX1P22670 U6.115-201ENST00000636045 103 ntBASIC4.15□□□□□ -1.75
RFX1P22670 U6.98-201ENST00000637157 84 ntBASIC4.15□□□□□ -1.75
RFX1P22670 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX1P22670 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX1P22670 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX1P22670 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFX1P22670 AC103988.1-201ENST00000566382 2177 ntBASIC4.14□□□□□ -1.75
RFX1P22670 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.14□□□□□ -1.75
RFX1P22670 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX1P22670 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RFX1P22670 RNU1-72P-201ENST00000362976 153 ntBASIC4.14□□□□□ -1.75
RFX1P22670 RNU1-18P-201ENST00000363062 164 ntBASIC4.14□□□□□ -1.75
RFX1P22670 RNU6-801P-201ENST00000364087 105 ntBASIC4.14□□□□□ -1.75
RFX1P22670 RNU6-1305P-201ENST00000364353 104 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AP002088.1-201ENST00000382740 395 ntBASIC4.14□□□□□ -1.75
RFX1P22670 RNU6-187P-201ENST00000384139 106 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AL357075.1-201ENST00000404107 726 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AL139281.1-201ENST00000422120 335 ntBASIC4.14□□□□□ -1.75
RFX1P22670 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
RFX1P22670 RAC1P5-201ENST00000512182 576 ntBASIC4.14□□□□□ -1.75
RFX1P22670 RNU6-1219P-201ENST00000516143 112 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX1P22670 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX1P22670 AC020914.4-201ENST00000597690 277 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AC021753.1-201ENST00000635724 168 ntBASIC4.14□□□□□ -1.75
RFX1P22670 AC244205.2-202ENST00000635781 342 ntBASIC4.14□□□□□ -1.75
RFX1P22670 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RFX1P22670 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX1P22670 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX1P22670 AL157777.2-201ENST00000258070 137 ntBASIC4.13□□□□□ -1.75
RFX1P22670 RNU1-35P-201ENST00000362782 153 ntBASIC4.13□□□□□ -1.75
RFX1P22670 SNORA68.1-201ENST00000364537 132 ntBASIC4.13□□□□□ -1.75
RFX1P22670 RNU6-763P-201ENST00000390865 106 ntBASIC4.13□□□□□ -1.75
RFX1P22670 NDUFB4P4-201ENST00000404822 243 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AL357139.1-201ENST00000407792 426 ntBASIC4.13□□□□□ -1.75
RFX1P22670 MIR1185-2-201ENST00000408687 86 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX1P22670 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
RFX1P22670 HMGN2P9-201ENST00000476875 229 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX1P22670 SCARNA3-201ENST00000517097 143 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX1P22670 MIR5195-201ENST00000583555 115 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AL713866.2-201ENST00000603579 219 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AC090517.3-201ENST00000625170 141 ntBASIC4.13□□□□□ -1.75
RFX1P22670 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX1P22670 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFX1P22670 AC006504.1-201ENST00000562493 3666 ntBASIC4.13□□□□□ -1.75
RFX1P22670 AL365361.1-201ENST00000566942 3481 ntBASIC4.13□□□□□ -1.75
RFX1P22670 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX1P22670 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.12□□□□□ -1.75
RFX1P22670 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX1P22670 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX1P22670 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX1P22670 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFX1P22670 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RFX1P22670 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFX1P22670 AC017083.1-201ENST00000428093 483 ntBASIC4.12□□□□□ -1.75
RFX1P22670 U8.19-201ENST00000459095 133 ntBASIC4.12□□□□□ -1.75
RFX1P22670 AC091021.1-201ENST00000468051 388 ntBASIC4.12□□□□□ -1.75
RFX1P22670 TRBV12-2-201ENST00000489763 344 ntBASIC4.12□□□□□ -1.75
RFX1P22670 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.12□□□□□ -1.75
RFX1P22670 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX1P22670 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX1P22670 AC009487.4-201ENST00000624969 3585 ntBASIC4.12□□□□□ -1.75
RFX1P22670 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RFX1P22670 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX1P22670 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX1P22670 Y_RNA.170-201ENST00000363746 110 ntBASIC4.11□□□□□ -1.75
RFX1P22670 RNU6-1274P-201ENST00000384557 107 ntBASIC4.11□□□□□ -1.75
RFX1P22670 MIR1283-1-201ENST00000408494 87 ntBASIC4.11□□□□□ -1.75
RFX1P22670 SNORA3.3-201ENST00000408712 125 ntBASIC4.11□□□□□ -1.75
RFX1P22670 RNU6-394P-201ENST00000410735 107 ntBASIC4.11□□□□□ -1.75
RFX1P22670 AL135790.2-201ENST00000437701 267 ntBASIC4.11□□□□□ -1.75
RFX1P22670 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.11□□□□□ -1.75
RFX1P22670 SNORA59A-201ENST00000459326 152 ntBASIC4.11□□□□□ -1.75
RFX1P22670 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX1P22670 RNU6-586P-201ENST00000517265 104 ntBASIC4.11□□□□□ -1.75
RFX1P22670 MIR3910-1-201ENST00000580936 111 ntBASIC4.11□□□□□ -1.75
RFX1P22670 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RFX1P22670 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX1P22670 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
RFX1P22670 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
RFX1P22670 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.1□□□□□ -1.75
RFX1P22670 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
RFX1P22670 RNU6-234P-201ENST00000365229 104 ntBASIC4.1□□□□□ -1.75
RFX1P22670 Y_RNA.368-201ENST00000365547 113 ntBASIC4.1□□□□□ -1.75
RFX1P22670 RNU6-1328P-201ENST00000410938 106 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AL451074.5-201ENST00000415894 435 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AL035423.1-201ENST00000420331 213 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RFX1P22670 RPS12P18-201ENST00000442381 270 ntBASIC4.1□□□□□ -1.75
RFX1P22670 AC074290.1-201ENST00000448883 135 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms