| TFE3 | P19532 | YME1L1P1-201 | ENST00000429435 | 297 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC008155.2-201 | ENST00000464337 | 397 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | KRTAP13-6P-201 | ENST00000508999 | 371 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC022559.1-201 | ENST00000520905 | 205 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC009623.2-201 | ENST00000522524 | 465 nt | TSL 3 BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC007598.2-201 | ENST00000569490 | 539 nt | TSL 3 BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC012254.1-201 | ENST00000592747 | 200 nt | TSL 3 BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | UCA1.1-201 | ENST00000620952 | 75 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| TFE3 | P19532 | RNF6-201 | ENST00000346166 | 3282 nt | APPRIS P1 TSL 1 (best) BASIC | 3.59 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | CYSLTR1-203 | ENST00000614798 | 2681 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL161912.2-201 | ENST00000565707 | 3007 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | USP9Y-201 | ENST00000338981 | 10036 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ELF1-201 | ENST00000239882 | 3566 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR670-201 | ENST00000390142 | 98 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SNORA48.7-201 | ENST00000391302 | 135 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL357552.1-201 | ENST00000445254 | 415 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL020994.3-201 | ENST00000449126 | 274 nt | TSL 3 BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC004917.1-201 | ENST00000490856 | 575 nt | TSL 4 BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC110768.1-201 | ENST00000509222 | 400 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | Y_RNA.703-201 | ENST00000516846 | 111 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-255P-201 | ENST00000516957 | 105 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AP003171.1-201 | ENST00000532770 | 266 nt | TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR3684-201 | ENST00000579779 | 74 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL513302.2-201 | ENST00000562313 | 1842 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | PHTF2-202 | ENST00000275575 | 4541 nt | TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ADGRV1-201 | ENST00000405460 | 19557 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SNORD115-30-201 | ENST00000364117 | 82 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR591-201 | ENST00000385290 | 95 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL031003.1-201 | ENST00000404229 | 172 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR1183-201 | ENST00000408856 | 89 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RN7SL293P-201 | ENST00000481765 | 281 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SNORA70.14-201 | ENST00000516205 | 110 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNY3P16-201 | ENST00000516338 | 101 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR2276-201 | ENST00000516886 | 89 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SCARNA11.3-201 | ENST00000517276 | 130 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC016885.2-201 | ENST00000522598 | 261 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ARHGAP11A-207 | ENST00000565905 | 3318 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | U3.45-201 | ENST00000607547 | 219 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL078604.3-201 | ENST00000615580 | 211 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | FAM214A-216 | ENST00000619572 | 3548 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC093908.1-201 | ENST00000623125 | 8092 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL356274.2-201 | ENST00000624379 | 3752 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC000403.1-201 | ENST00000613696 | 3585 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR30E-201 | ENST00000362104 | 92 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNA5SP119-201 | ENST00000362715 | 117 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-774P-201 | ENST00000363238 | 107 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | Y_RNA.243-201 | ENST00000364481 | 109 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR23B-201 | ENST00000384832 | 97 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNA5SP171-201 | ENST00000391071 | 115 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL139281.1-201 | ENST00000422120 | 335 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | KCNJ6-AS1-201 | ENST00000435001 | 357 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RPS4XP2-201 | ENST00000458402 | 793 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC074198.2-201 | ENST00000508153 | 258 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-1278P-201 | ENST00000516130 | 107 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | NDUFB9P3-201 | ENST00000521269 | 501 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC103794.1-201 | ENST00000531763 | 197 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR4425-201 | ENST00000580572 | 84 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR4308-201 | ENST00000580634 | 81 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | U91328.3-201 | ENST00000608931 | 354 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL008718.3-201 | ENST00000610217 | 321 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | KCNH7-204 | ENST00000618399 | 3713 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ABCD2-201 | ENST00000308666 | 6238 nt | APPRIS P1 TSL 1 (best) BASIC | 3.56 | □□□□□ -1.84 | | |
| TFE3 | P19532 | TSLP-202 | ENST00000379706 | 2411 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ATF2-204 | ENST00000409437 | 3697 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MFSD8-233 | ENST00000641482 | 4860 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-1305P-201 | ENST00000364353 | 104 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | PVALB-202 | ENST00000404171 | 422 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL357139.1-201 | ENST00000407792 | 426 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RPL21P129-201 | ENST00000491732 | 478 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC068658.1-201 | ENST00000507509 | 388 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MRPS36P2-201 | ENST00000512569 | 299 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | LINC01965-204 | ENST00000545549 | 575 nt | TSL 4 BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR7851-201 | ENST00000610611 | 160 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | U6.105-201 | ENST00000637379 | 88 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SAMD3-214 | ENST00000532763 | 3690 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC091564.4-201 | ENST00000533934 | 2194 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| TFE3 | P19532 | PTPN22-211 | ENST00000538253 | 3575 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | PHF6-201 | ENST00000332070 | 4759 nt | APPRIS P2 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR183-201 | ENST00000384958 | 110 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR449B-201 | ENST00000384995 | 97 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR548B-201 | ENST00000385247 | 97 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR300-201 | ENST00000401138 | 83 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC074290.1-201 | ENST00000448883 | 135 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SCARNA17.1-201 | ENST00000516211 | 143 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SCARNA17.2-201 | ENST00000516334 | 143 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SNORA70.19-201 | ENST00000516717 | 90 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC136628.3-201 | ENST00000521868 | 290 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR3133-201 | ENST00000583157 | 78 nt | BASIC | 3.54 | □□□□□ -1.84 | | |