Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL109809.4-201ENST00000603520 2185 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN1P18031 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PTPN1P18031 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN1P18031 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 RNU6-625P-201ENST00000459412 107 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 S100A11P2-201ENST00000467589 312 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 AC091179.3-201ENST00000474761 144 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 AC103975.1-201ENST00000482506 483 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN1P18031 AC018448.1-201ENST00000552843 316 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN1P18031 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN1P18031 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN1P18031 AC098479.1-201ENST00000609225 154 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 PCGEM1.1-201ENST00000613431 131 ntBASIC3.27□□□□□ -1.89
PTPN1P18031 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN1P18031 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.27□□□□□ -1.89
PTPN1P18031 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN1P18031 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
PTPN1P18031 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PTPN1P18031 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPN1P18031 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU1-62P-201ENST00000362599 164 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU4-15P-201ENST00000362613 141 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 Y_RNA.44-201ENST00000362676 108 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 Y_RNA.117-201ENST00000363294 101 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU6-1210P-201ENST00000363775 107 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 Y_RNA.785-201ENST00000384290 109 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU1-57P-201ENST00000384491 166 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU4-70P-201ENST00000384579 139 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 IFNA11P-201ENST00000446352 526 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPN1P18031 AL121594.1-201ENST00000475906 575 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RPL23AP70-201ENST00000483361 460 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RPL36AP48-201ENST00000485521 314 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU6-182P-201ENST00000516970 105 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 RNU6-711P-201ENST00000517255 106 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 MIR4643-201ENST00000577473 78 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN1P18031 IGHVIII-44-202ENST00000636235 289 ntBASIC3.26□□□□□ -1.89
PTPN1P18031 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPN1P18031 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPN1P18031 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PTPN1P18031 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN1P18031 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN1P18031 SNORA25.1-201ENST00000362326 128 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 SNORA71.1-201ENST00000364523 117 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 Y_RNA.274-201ENST00000364714 101 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 SNORA14A-201ENST00000364773 135 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 Y_RNA.331-201ENST00000365267 102 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 SNORA18.3-201ENST00000384122 132 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 RPL23AP36-201ENST00000413895 458 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN1P18031 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN1P18031 AC009969.1-201ENST00000438726 172 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 SNORA81.3-201ENST00000517283 198 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 AC079598.5-201ENST00000547460 117 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 AC008749.1-201ENST00000597650 306 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 AC006001.4-201ENST00000622243 395 ntBASIC3.25□□□□□ -1.89
PTPN1P18031 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN1P18031 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.25□□□□□ -1.89
PTPN1P18031 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN1P18031 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTPN1P18031 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTPN1P18031 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTPN1P18031 U3.9-201ENST00000363823 204 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 Y_RNA.200-201ENST00000364018 102 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 Y_RNA.297-201ENST00000364950 91 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 SNORA72.2-201ENST00000365028 127 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 RNU6-514P-201ENST00000384208 107 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 Y_RNA.498-201ENST00000384460 102 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 AL139156.1-201ENST00000412785 841 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.24□□□□□ -1.89
PTPN1P18031 RPS3P1-201ENST00000456781 192 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 AC145146.1-201ENST00000496370 254 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 EIF4A1P12-201ENST00000551910 141 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 AC026470.2-201ENST00000561492 181 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
PTPN1P18031 AC055872.1-201ENST00000570978 278 ntBASIC3.24□□□□□ -1.89
PTPN1P18031 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTPN1P18031 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.23□□□□□ -1.89
PTPN1P18031 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN1P18031 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN1P18031 Y_RNA.29-201ENST00000362570 113 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 RNU6-727P-201ENST00000363592 107 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 Y_RNA.446-201ENST00000384178 104 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 RNA5SP354-201ENST00000391247 136 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 MIR1298-201ENST00000408783 112 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 ELOCP21-201ENST00000412558 336 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 RAB28P5-201ENST00000427490 651 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 POLR2KP2-201ENST00000438155 177 ntBASIC3.23□□□□□ -1.89
PTPN1P18031 RPL23AP3-201ENST00000453844 468 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms