Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6-1010P-201ENST00000362757 107 ntBASIC3.75□□□□□ -1.81
NID1P14543 SNORD35B-201ENST00000363660 87 ntBASIC3.75□□□□□ -1.81
NID1P14543 RNU6-674P-201ENST00000363831 107 ntBASIC3.75□□□□□ -1.81
NID1P14543 RNU6-1305P-201ENST00000364353 104 ntBASIC3.75□□□□□ -1.81
NID1P14543 RNU6-309P-201ENST00000364573 106 ntBASIC3.75□□□□□ -1.81
NID1P14543 RNU6-554P-201ENST00000410466 106 ntBASIC3.75□□□□□ -1.81
NID1P14543 AC126124.2-201ENST00000413542 321 ntBASIC3.75□□□□□ -1.81
NID1P14543 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.75□□□□□ -1.81
NID1P14543 snoU13.22-201ENST00000459428 104 ntBASIC3.75□□□□□ -1.81
NID1P14543 RPL36AP21-201ENST00000490372 323 ntBASIC3.75□□□□□ -1.81
NID1P14543 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.75□□□□□ -1.81
NID1P14543 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.75□□□□□ -1.81
NID1P14543 MIR3158-1-201ENST00000583596 81 ntBASIC3.75□□□□□ -1.81
NID1P14543 AL049861.1-201ENST00000603130 150 ntBASIC3.75□□□□□ -1.81
NID1P14543 AC005972.2-201ENST00000604690 348 ntBASIC3.75□□□□□ -1.81
NID1P14543 RNU6-91P-201ENST00000607774 107 ntBASIC3.75□□□□□ -1.81
NID1P14543 AL021707.8-201ENST00000609428 183 ntBASIC3.75□□□□□ -1.81
NID1P14543 AL138880.2-201ENST00000616214 239 ntBASIC3.75□□□□□ -1.81
NID1P14543 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.75□□□□□ -1.81
NID1P14543 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NID1P14543 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NID1P14543 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
NID1P14543 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.75□□□□□ -1.81
NID1P14543 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NID1P14543 AC007656.2-201ENST00000624902 4547 ntBASIC3.75□□□□□ -1.81
NID1P14543 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.75□□□□□ -1.81
NID1P14543 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 RNU6-50P-201ENST00000362356 103 ntBASIC3.74□□□□□ -1.81
NID1P14543 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.81
NID1P14543 Y_RNA.348-201ENST00000365403 103 ntBASIC3.74□□□□□ -1.81
NID1P14543 RNU6-748P-201ENST00000384648 107 ntBASIC3.74□□□□□ -1.81
NID1P14543 SNORD72-201ENST00000390994 80 ntBASIC3.74□□□□□ -1.81
NID1P14543 RN7SKP177-201ENST00000410567 355 ntBASIC3.74□□□□□ -1.81
NID1P14543 AL356095.1-201ENST00000417217 199 ntBASIC3.74□□□□□ -1.81
NID1P14543 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.74□□□□□ -1.81
NID1P14543 AL445584.1-201ENST00000431451 330 ntBASIC3.74□□□□□ -1.81
NID1P14543 AL121890.1-201ENST00000435457 205 ntBASIC3.74□□□□□ -1.81
NID1P14543 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 RPL23AP62-201ENST00000463396 453 ntBASIC3.74□□□□□ -1.81
NID1P14543 RPL21P10-201ENST00000463521 490 ntBASIC3.74□□□□□ -1.81
NID1P14543 Vault.1-201ENST00000516474 102 ntBASIC3.74□□□□□ -1.81
NID1P14543 RNA5SP153-201ENST00000516498 76 ntBASIC3.74□□□□□ -1.81
NID1P14543 GNRHR2P1-201ENST00000555315 631 ntBASIC3.74□□□□□ -1.81
NID1P14543 AC025627.2-201ENST00000576220 160 ntBASIC3.74□□□□□ -1.81
NID1P14543 AC073308.1-201ENST00000623696 305 ntBASIC3.74□□□□□ -1.81
NID1P14543 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NID1P14543 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.74□□□□□ -1.81
NID1P14543 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NID1P14543 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NID1P14543 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NID1P14543 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
NID1P14543 AC007496.3-201ENST00000624987 3443 ntBASIC3.73□□□□□ -1.81
NID1P14543 RNU6-508P-201ENST00000363231 103 ntBASIC3.73□□□□□ -1.81
NID1P14543 RNU6-640P-201ENST00000363693 105 ntBASIC3.73□□□□□ -1.81
NID1P14543 Y_RNA.281-201ENST00000364774 94 ntBASIC3.73□□□□□ -1.81
NID1P14543 SNORA70.4-201ENST00000365509 134 ntBASIC3.73□□□□□ -1.81
NID1P14543 Y_RNA.558-201ENST00000384685 113 ntBASIC3.73□□□□□ -1.81
NID1P14543 MIR586-201ENST00000385035 97 ntBASIC3.73□□□□□ -1.81
NID1P14543 MIR1251-201ENST00000408552 70 ntBASIC3.73□□□□□ -1.81
NID1P14543 MIR1185-2-201ENST00000408687 86 ntBASIC3.73□□□□□ -1.81
NID1P14543 RNU2-70P-201ENST00000410718 179 ntBASIC3.73□□□□□ -1.81
NID1P14543 AL117339.2-201ENST00000430475 180 ntBASIC3.73□□□□□ -1.81
NID1P14543 RPS3P1-201ENST00000456781 192 ntBASIC3.73□□□□□ -1.81
NID1P14543 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
NID1P14543 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
NID1P14543 HSPE1P18-201ENST00000517602 280 ntBASIC3.73□□□□□ -1.81
NID1P14543 AC018630.3-201ENST00000542637 96 ntBASIC3.73□□□□□ -1.81
NID1P14543 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NID1P14543 AC069200.1-201ENST00000609511 323 ntBASIC3.73□□□□□ -1.81
NID1P14543 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NID1P14543 MAPK10-253ENST00000641010 4072 ntBASIC3.73□□□□□ -1.81
NID1P14543 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NID1P14543 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NID1P14543 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NID1P14543 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NID1P14543 RNU6-766P-201ENST00000362478 107 ntBASIC3.72□□□□□ -1.81
NID1P14543 RNU6-271P-201ENST00000363858 105 ntBASIC3.72□□□□□ -1.81
NID1P14543 RNU6-1107P-201ENST00000364817 104 ntBASIC3.72□□□□□ -1.81
NID1P14543 Y_RNA.388-201ENST00000383919 113 ntBASIC3.72□□□□□ -1.81
NID1P14543 SNORA72-201ENST00000384339 132 ntBASIC3.72□□□□□ -1.81
NID1P14543 MIR607-201ENST00000385241 96 ntBASIC3.72□□□□□ -1.81
NID1P14543 AL355796.1-201ENST00000406706 323 ntBASIC3.72□□□□□ -1.81
NID1P14543 CYCSP19-201ENST00000411715 316 ntBASIC3.72□□□□□ -1.81
NID1P14543 AL135786.1-201ENST00000415892 214 ntBASIC3.72□□□□□ -1.81
NID1P14543 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
NID1P14543 AL441985.1-201ENST00000457727 251 ntBASIC3.72□□□□□ -1.81
NID1P14543 AC078918.1-201ENST00000498515 228 ntBASIC3.72□□□□□ -1.81
NID1P14543 AC023141.12-201ENST00000512399 199 ntBASIC3.72□□□□□ -1.81
NID1P14543 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.72□□□□□ -1.81
NID1P14543 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
NID1P14543 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms