Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AP001486.1-201ENST00000463339 476 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RN7SL807P-201ENST00000470923 297 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RPL32P34-201ENST00000486380 400 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RNU6-1234P-201ENST00000516877 103 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 AC112693.2-201ENST00000556538 232 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD8P13378 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD8P13378 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD8P13378 AC011603.4-201ENST00000611325 277 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD8P13378 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
HOXD8P13378 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD8P13378 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD8P13378 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD8P13378 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD8P13378 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD8P13378 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD8P13378 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXD8P13378 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD8P13378 RNU6-215P-201ENST00000365169 102 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 RNU6-44P-201ENST00000384045 107 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 BX510359.1-201ENST00000456973 237 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 AC025518.1-201ENST00000479856 347 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 AC145146.1-201ENST00000496370 254 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 RN7SKP57-201ENST00000517248 293 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 HSPE1P18-201ENST00000517602 280 ntBASIC3.94□□□□□ -1.78
HOXD8P13378 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD8P13378 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD8P13378 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD8P13378 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD8P13378 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD8P13378 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD8P13378 MIR367-201ENST00000362299 68 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 RNU6-529P-201ENST00000363383 104 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 Y_RNA.218-201ENST00000364218 104 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 Y_RNA.572-201ENST00000384757 98 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 AL355497.1-201ENST00000406262 551 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
HOXD8P13378 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD8P13378 RN7SL594P-201ENST00000470590 287 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 RPL30P14-201ENST00000482744 348 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 RNU6-919P-201ENST00000516731 104 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 RNU6-453P-201ENST00000516819 85 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 AL391813.1-201ENST00000603098 260 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 TUG1_4.1-201ENST00000619464 181 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 MIR6852-201ENST00000621699 66 ntBASIC3.93□□□□□ -1.78
HOXD8P13378 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD8P13378 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD8P13378 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD8P13378 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD8P13378 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD8P13378 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD8P13378 AC110774.1-201ENST00000623567 2018 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 AC007656.2-201ENST00000624902 4547 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 FAM35DP-201ENST00000323387 2712 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 RNA5SP42-201ENST00000364278 115 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 MIR616-201ENST00000385293 97 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 SNORA70.12-201ENST00000516084 153 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 RNU1-61P-201ENST00000516107 151 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 RNU2-44P-201ENST00000516795 194 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 SNORD19.2-201ENST00000516978 73 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 AC091152.3-201ENST00000604227 325 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 U4.6-201ENST00000621618 127 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 AL136164.4-201ENST00000625013 2135 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD8P13378 AC006504.1-201ENST00000562493 3666 ntBASIC3.92□□□□□ -1.78
HOXD8P13378 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD8P13378 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD8P13378 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD8P13378 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD8P13378 Y_RNA.500-201ENST00000384466 111 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 Y_RNA.521-201ENST00000384560 114 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 Y_RNA.542-201ENST00000384641 111 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 MIR15B-201ENST00000385045 98 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 RNA5SP201-201ENST00000410316 124 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AC004866.1-201ENST00000411748 78 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AL139281.1-201ENST00000422120 335 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AC017083.1-201ENST00000428093 483 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 HSPE1P21-201ENST00000438283 308 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 SRIP1-201ENST00000489235 288 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 RPS27P26-201ENST00000494583 239 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD8P13378 Y_RNA.686-201ENST00000516548 134 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD8P13378 MIR4724-201ENST00000579485 89 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD8P13378 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXD8P13378 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD8P13378 RNU6-91P-201ENST00000607774 107 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 MIR8058-201ENST00000615737 89 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 AC002076.2-201ENST00000617362 122 ntBASIC3.91□□□□□ -1.78
HOXD8P13378 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD8P13378 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD8P13378 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HOXD8P13378 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD8P13378 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.78
HOXD8P13378 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD8P13378 Y_RNA.40-201ENST00000362645 93 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 RNU6-1010P-201ENST00000362757 107 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms